myRT

myRT report for GCA_004562765.1_ASM456276v1

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Seq: SFRL01000051.1 (27778 bp)
Overview 1 RT 1: 14760-20785 bp Neighborhood of RT #1 [14760, 20910] INT_RitB_C_like Phage_int_SAM_1 INT_RitA_C_like RVT-GII GIIM MazF PRK14709 Feature: gene Location: 14760-15743 bp Feature: domain Description: INT_RitB_C_like Location: 15096-15681 bp Feature: domain Description: INT_RitB_C_like Location: 1 5096-1 5681 bp Feature: gene Location: 15736-16971 bp Feature: domain Description: Phage_int_SAM_1 Location: 16108-16315 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 61 08-1 631 5 bp Feature: domain Description: INT_RitA_C_like Location: 16405-16945 bp Feature: domain Description: INT_RitA_C_like Location: 1 6405-1 6945 bp Feature: gene Location: 17149-17817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17152-17359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 52-1 7359 bp Feature: domain Description: GIIM Note: maturase Location: 17419-17638 bp Feature: domain Description: GIIM Note: maturase Location: 1 741 9-1 7638 bp Feature: gene Location: 17979-18401 bp Feature: domain Description: MazF Location: 18045-18378 bp Feature: domain Description: MazF Location: 1 8045-1 8378 bp Feature: gene Location: 18469-20910 bp Feature: domain Description: PRK14709 Location: 19537-20785 bp Feature: domain Description: PRK1 4709 Location: 1 9537-20785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), RVT-GII, GIIM (pfam08388), MazF (COG2337), PRK14709 (hypothetical protein; Provisional)

Seq: SFRL01000006.1 (83086 bp)
Overview 1 RT 1: 50821-53195 bp Neighborhood of RT #1 [50821, 53284] Avd_like PHA00653 RVT-DGRs Phage_holin_4_1 Feature: gene Location: 50821-51192 bp Feature: domain Description: Avd_like Location: 50851-51154 bp Feature: domain Description: Avd_like Location: 50851-51154 bp Feature: gene Location: 51197-51430 bp Feature: domain Description: PHA00653 Location: 51218-51350 bp Feature: domain Description: PHA00653 Location: 512 18-51350 bp Feature: gene Location: 51515-52591 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51752-52373 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51752 -52 373 bp Feature: gene Location: 52617-52787 bp Feature: gene Location: 52793-53284 bp Feature: domain Description: Phage_holin_4_1 Location: 52832-53195 bp Feature: domain Description: Phage_holin_4_1 Location: 52 832 -53195 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), PHA00653 (mtd;major tropism determinant), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: SFRL01000005.1 (86761 bp)
Overview 1 RT 1: 29263-33091 bp Neighborhood of RT #1 [29263, 33720] Phage_XkdX RVT-DGRs DUF2313 Feature: gene Location: 29263-29439 bp Feature: domain Description: Phage_XkdX Location: 29293-29428 bp Feature: domain Description: Phage_XkdX Location: 29293 -29428 bp Feature: gene Location: 29452-29640 bp Feature: gene Location: 29681-30862 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29900-30461 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29900-3 0461 bp Feature: gene Location: 31266-32867 bp Feature: gene Location: 32857-33720 bp Feature: domain Description: DUF2313 Location: 32863-33091 bp Feature: domain Description: DUF23 13 Location: 3 2863 -3 3 091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, DUF2313 (pfam10076)

Seq: SFRL01000092.1 (11450 bp)
Overview 1 RT 1: 6781-9013 bp Neighborhood of RT #1 [6781, 9013] RVT-DGRs Feature: gene Location: 6781-6918 bp Feature: gene Location: 6985-7236 bp Feature: gene Location: 7104-8354 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7302-7932 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7302-7932 bp Feature: gene Location: 8478-8639 bp Feature: gene Location: 8645-9013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs