myRT

myRT report for GCA_004562915.1_ASM456291v1

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Seq: SFQZ01000168.1 (4763 bp)
Overview 1 RT 1: 1-4219 bp Neighborhood of RT #1 [1, 4761] RVT-GII Phage_int_SAM_1 INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 1-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52-41 8 bp Feature: gene Location: 584-1819 bp Feature: domain Description: Phage_int_SAM_1 Location: 941-1169 bp Feature: domain Description: Phage_int_SAM_1 Location: 941 -1 1 69 bp Feature: domain Description: INT_RitA_C_like Location: 1253-1784 bp Feature: domain Description: INT_RitA_C_like Location: 1 253-1 784 bp Feature: gene Location: 1851-2792 bp Feature: domain Description: INT_RitB_C_like Location: 2148-2727 bp Feature: domain Description: INT_RitB_C_like Location: 21 48-2727 bp Feature: gene Location: 2944-3789 bp Feature: domain Description: Phage_int_SAM_1 Location: 2953-3076 bp Feature: domain Description: Phage_int_SAM_1 Location: 2953-3076 bp Feature: domain Description: INT_RitC_C_like Location: 3157-3709 bp Feature: domain Description: INT_RitC_C_like Location: 31 57-3709 bp Feature: gene Location: 3922-4761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3925-4219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3925-421 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SFQZ01000046.1 (23852 bp)
Overview 1 RT 1: 731-5842 bp Neighborhood of RT #1 [731, 5862] VirD4 RVT-GII VirD4 DUF3801 Feature: gene Location: 731-1717 bp Feature: domain Description: VirD4 Location: 797-1595 bp Feature: domain Description: VirD4 Location: 797-1595 bp Feature: gene Location: 1747-1929 bp Feature: gene Location: 1933-3840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2263-3007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 63-3007 bp Feature: gene Location: 4499-5302 bp Feature: domain Description: VirD4 Location: 4724-5264 bp Feature: domain Description: VirD4 Location: 472 4-52 64 bp Feature: gene Location: 5299-5862 bp Feature: domain Description: DUF3801 Location: 5482-5842 bp Feature: domain Description: DUF3801 Location: 5482 -5842 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SFQZ01000176.1 (4457 bp)
Overview 1 RT 1: 356-3019 bp Neighborhood of RT #1 [356, 3045] ChiA1_BD RVT-DGRs Avd_like Feature: gene Location: 356-658 bp Feature: gene Location: 812-1234 bp Feature: domain Description: ChiA1_BD Location: 920-1049 bp Feature: domain Description: ChiA1_BD Location: 920-1049 bp Feature: gene Location: 1469-2491 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1670-2264 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1670-2264 bp Feature: gene Location: 2424-2672 bp Feature: gene Location: 2677-3045 bp Feature: domain Description: Avd_like Location: 2746-3019 bp Feature: domain Description: Avd_like Location: 2746-3 019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SFQZ01000005.1 (140819 bp)
Overview 1 RT 1: 14448-16680 bp Neighborhood of RT #1 [14448, 16691] XhlA RVT-DGRs Avd_like Feature: gene Location: 14448-14681 bp Feature: domain Description: XhlA Location: 14529-14670 bp Feature: domain Description: XhlA Location: 14 529-14 670 bp Feature: gene Location: 14700-14960 bp Feature: gene Location: 14935-15987 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 15145-15751 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1514 5-15751 bp Feature: gene Location: 16127-16282 bp Feature: gene Location: 16287-16691 bp Feature: domain Description: Avd_like Location: 16374-16680 bp Feature: domain Description: Avd_like Location: 16374 -16680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SFQZ01000286.1 (3473 bp)
Overview 1 RT 1: 2-2887 bp Neighborhood of RT #1 [2, 2991] Y1_Tnp RVT-GII GIIM Y1_Tnp InsQ Feature: gene Location: 2-127 bp Feature: domain Description: Y1_Tnp Location: 29-107 bp Feature: domain Description: Y1_Tnp Location: 29-107 bp Feature: gene Location: 443-616 bp Feature: gene Location: 646-1968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1606 bp Feature: domain Description: GIIM Note: maturase Location: 1669-1882 bp Feature: domain Description: GIIM Note: maturase Location: 1669-1882 bp Feature: gene Location: 2109-2366 bp Feature: domain Description: Y1_Tnp Location: 2115-2355 bp Feature: domain Description: Y1_Tnp Location: 2115 -235 5 bp Feature: gene Location: 2356-2991 bp Feature: domain Description: InsQ Location: 2374-2887 bp Feature: domain Description: InsQ Location: 2374-2887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SFQZ01000207.1 (6278 bp)
Overview 1 RT 1: 96-3904 bp Neighborhood of RT #1 [96, 4020] RVT-GII HNHc PrgI Feature: gene Location: 96-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-1170 bp Feature: domain Description: HNHc Note: nucleases Location: 1725-1863 bp Feature: domain Description: HNHc Note: nucleases Location: 1725-186 3 bp Feature: gene Location: 2697-3650 bp Feature: gene Location: 3616-4020 bp Feature: domain Description: PrgI Location: 3634-3904 bp Feature: domain Description: PrgI Location: 36 34-3904 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SFQZ01000175.1 (8391 bp)
Overview 1 RT 1: 4262-8275 bp Neighborhood of RT #1 [4262, 8343] VirD4 RVT_N RVT-GII GIIM TraG-D_C Feature: gene Location: 4262-5041 bp Feature: domain Description: VirD4 Location: 4535-4880 bp Feature: domain Description: VirD4 Location: 4535-4880 bp Feature: gene Location: 5323-5469 bp Feature: gene Location: 5624-7288 bp Feature: domain Description: RVT_N Location: 5669-5912 bp Feature: domain Description: RVT_N Location: 5669-5912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5957-6608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5957 -6608 bp Feature: domain Description: GIIM Note: maturase Location: 6659-6893 bp Feature: domain Description: GIIM Note: maturase Location: 6659-6893 bp Feature: gene Location: 7432-8343 bp Feature: domain Description: TraG-D_C Location: 7975-8275 bp Feature: domain Description: TraG-D_C Location: 7 97 5-827 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT