myRT

myRT report for GCA_004563365.1_ASM456336v1

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Seq: SFSJ01000008.1 Bacterium isolate W0P7.035 Contig1616, whole genome shotgun sequence (13604 bp)
Overview 1 RT 1: 10864-13603 bp Neighborhood of RT #1 [10864, 13602] MutS_I Avd_like RVT-DGRs MutS_I HTH_26 Feature: gene Location: 10864-11316 bp Feature: domain Description: MutS_I Location: 10888-11152 bp Feature: domain Description: MutS_I Location: 1 0888-1 1 1 52 bp Feature: gene Location: 11297-11638 bp Feature: domain Description: Avd_like Location: 11321-11633 bp Feature: domain Description: Avd_like Location: 1 1 321 -1 1 633 bp Feature: gene Location: 12045-13034 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12255-12846 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 2255-1 2846 bp Feature: gene Location: 13018-13461 bp Feature: domain Description: MutS_I Location: 13036-13273 bp Feature: domain Description: MutS_I Location: 1 3036-1 3273 bp Feature: gene Location: 13462-13602 bp Feature: domain Description: HTH_26 Location: 13471-13603 bp Feature: domain Description: HTH_26 Location: 1 3471 -1 3603 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MutS_I (pfam01624), Avd_like (cd16376), RVT-DGRs, HTH_26 (pfam13443)

Seq: SFSJ01000021.1 Bacterium isolate W0P7.035 Contig2407, whole genome shotgun sequence (9982 bp)
Overview 1 RT 1: 98-4071 bp Neighborhood of RT #1 [98, 4145] RVT-UG5 LicD GT4_CapH-like Feature: gene Location: 98-2149 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 632-1241 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 632 -12 41 bp Feature: gene Location: 2231-3049 bp Feature: domain Description: LicD Location: 2237-2990 bp Feature: domain Description: LicD Location: 2 2 37-2 990 bp Feature: gene Location: 3057-4145 bp Feature: domain Description: GT4_CapH-like Location: 3063-4071 bp Feature: domain Description: GT4_CapH-like Location: 3063-4071 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, LicD (pfam04991), GT4_CapH-like (cd03812)

Seq: SFSJ01000034.1 Bacterium isolate W0P7.035 Contig3175, whole genome shotgun sequence (7935 bp)
Overview 1 RT 1: 1-2085 bp Neighborhood of RT #1 [1, 2285] RVT-DGRs Avd_like MutS Feature: gene Location: 1-141 bp Feature: gene Location: 355-1242 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 448-925 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 448-925 bp Feature: gene Location: 1480-1839 bp Feature: domain Description: Avd_like Location: 1510-1828 bp Feature: domain Description: Avd_like Location: 1510-1828 bp Feature: gene Location: 1857-2285 bp Feature: domain Description: MutS Location: 1887-2085 bp Feature: domain Description: MutS Location: 1887-2085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), MutS (COG0249)