myRT

myRT report for GCA_004565465.1_UNH_Lsal_1.0

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Seq: SRHY01000056.1 (18665 bp)
Overview 1 RT 1: 3-13277 bp Neighborhood of RT #1 [3, 13303] AraC_E_bind RVT-GII GIIM GIIM PadR TnpB_IS66 COG3436 RVT-GII HNHc xerS INT_RitA_C_like INT_RitB_C_like Phage_int_SAM_4 INT_RitC_C_like RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Arr-ms Feature: gene Location: 3-251 bp Feature: domain Description: AraC_E_bind Location: 15-240 bp Feature: domain Description: AraC_E_bind Location: 1 5-240 bp Feature: gene Location: 786-971 bp Feature: gene Location: 1111-2547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1342-1963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 342-1 963 bp Feature: domain Description: GIIM Note: maturase Location: 2038-2155 bp Feature: domain Description: GIIM Note: maturase Location: 2038-21 55 bp Feature: domain Description: GIIM Note: maturase Location: 2230-2326 bp Feature: domain Description: GIIM Note: maturase Location: 2230-2326 bp Feature: gene Location: 2752-3132 bp Feature: domain Description: PadR Location: 2836-3112 bp Feature: domain Description: PadR Location: 2836-31 1 2 bp Feature: gene Location: 3134-4141 bp Feature: gene Location: 4820-5122 bp Feature: domain Description: TnpB_IS66 Location: 4823-5087 bp Feature: domain Description: TnpB_IS66 Location: 4823-5087 bp Feature: gene Location: 5198-5920 bp Feature: domain Description: COG3436 Location: 5471-5864 bp Feature: domain Description: COG3436 Location: 5471 -5864 bp Feature: gene Location: 6051-7163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6054-6360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6054-6360 bp Feature: domain Description: HNHc Note: nucleases Location: 6915-7053 bp Feature: domain Description: HNHc Note: nucleases Location: 691 5-7053 bp Feature: gene Location: 7324-8559 bp Feature: domain Description: xerS Location: 7645-7816 bp Feature: domain Description: xerS Location: 7645-781 6 bp Feature: domain Description: INT_RitA_C_like Location: 7993-8530 bp Feature: domain Description: INT_RitA_C_like Location: 7993-8530 bp Feature: gene Location: 8609-9538 bp Feature: domain Description: INT_RitB_C_like Location: 8888-9476 bp Feature: domain Description: INT_RitB_C_like Location: 8888-9476 bp Feature: gene Location: 9690-10538 bp Feature: domain Description: Phage_int_SAM_4 Location: 9717-9816 bp Feature: domain Description: Phage_int_SAM_4 Location: 971 7-981 6 bp Feature: domain Description: INT_RitC_C_like Location: 9903-10455 bp Feature: domain Description: INT_RitC_C_like Location: 9903-1 0455 bp Feature: gene Location: 10576-11400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10951-11332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0951 -1 1 332 bp Feature: gene Location: 12023-12898 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12032-12710 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 2032-1 271 0 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12731-12851 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 2731 -1 2851 bp Feature: gene Location: 12947-13303 bp Feature: domain Description: Arr-ms Location: 12986-13277 bp Feature: domain Description: Arr-ms Location: 1 2986-1 3277 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SRHY01000098.1 (2019 bp)
Overview 1 RT 1: 1-1523 bp Neighborhood of RT #1 [1, 1900] RVT-GII Feature: gene Location: 1-183 bp Feature: gene Location: 246-386 bp Feature: gene Location: 581-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-1523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 836-152 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SRHY01000094.1 (2179 bp)
Overview 1 RT 1: 109-1863 bp Neighborhood of RT #1 [109, 2084] RVT-GII GIIM GIIM Feature: gene Location: 109-288 bp Feature: gene Location: 648-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 876-1500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 876-1500 bp Feature: domain Description: GIIM Note: maturase Location: 1578-1692 bp Feature: domain Description: GIIM Note: maturase Location: 1578-1692 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1863 bp Feature: domain Description: GIIM Note: maturase Location: 1761-1863 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT