myRT

myRT report for GCA_004567225.1_ASM456722v1

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Seq: RZDV01000053.1 (12795 bp)
Overview 1 RT 1: 7194-11067 bp Neighborhood of RT #1 [7194, 11438] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7194-7370 bp Feature: gene Location: 7778-8482 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: gene Location: 8460-9830 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 8688-9294 bp Feature: gene Location: 9943-10527 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: domain Description: Caudo_TAP Location: 1 01 59-1 051 6 bp Feature: gene Location: 10536-11438 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Feature: domain Description: Macro_Appr_pase Location: 1 0554-1 1 067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: CM017208.1 (89744 bp)
Overview 1 RT 1: 59748-64123 bp Neighborhood of RT #1 [59748, 64123] Rve PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 59748-60464 bp Feature: domain Description: Rve Location: 59763-60408 bp Feature: domain Description: Rve Location: 59763-60408 bp Feature: gene Location: 60498-60740 bp Feature: domain Description: PRK13732 Location: 60504-60726 bp Feature: domain Description: PRK13732 Location: 60504-6072 6 bp Feature: gene Location: 60935-62836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61202-62033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 612 02 -62 033 bp Feature: domain Description: Intron_maturas2 Location: 62147-62405 bp Feature: domain Description: Intron_maturas2 Location: 62 147-62 405 bp Feature: domain Description: HNHc Note: nucleases Location: 62579-62741 bp Feature: domain Description: HNHc Note: nucleases Location: 62 579-62 741 bp Feature: gene Location: 63578-63781 bp Feature: gene Location: 63833-64123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZDV01000043.1 (22703 bp)
Overview 1 RT 1: 109-3734 bp Neighborhood of RT #1 [109, 3734] PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 109-351 bp Feature: domain Description: PRK13732 Location: 115-337 bp Feature: domain Description: PRK13 73 2 Location: 115-3 3 7 bp Feature: gene Location: 546-2447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 813-1644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 813 -1644 bp Feature: domain Description: Intron_maturas2 Location: 1758-2016 bp Feature: domain Description: Intron_maturas2 Location: 1758-2016 bp Feature: domain Description: HNHc Note: nucleases Location: 2190-2352 bp Feature: domain Description: HNHc Note: nucleases Location: 2190-23 52 bp Feature: gene Location: 3189-3392 bp Feature: gene Location: 3444-3734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZDV01000006.1 (181048 bp)
Overview 1 RT 1: 98438-102379 bp Neighborhood of RT #1 [98438, 102379] RVT-Retrons Feature: gene Location: 98438-99577 bp Feature: gene Location: 99623-99790 bp Feature: gene Location: 99812-101584 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99971-100589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99971-100589 bp Feature: gene Location: 101805-101948 bp Feature: gene Location: 102140-102379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZDV01000080.1 (2524 bp)
Overview 1 RT 1: 3-2466 bp Neighborhood of RT #1 [3, 2466] RVT-GII GIIM Feature: gene Location: 3-131 bp Feature: gene Location: 218-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1223 bp Feature: domain Description: GIIM Note: maturase Location: 1298-1496 bp Feature: domain Description: GIIM Note: maturase Location: 1298-1496 bp Feature: gene Location: 2035-2466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)