myRT

myRT report for GCA_004567365.1_ASM456736v1

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Seq: RZFX01000071.1 (22705 bp)
Overview 1 RT 1: 19375-22583 bp Neighborhood of RT #1 [19375, 22597] RVT-GII Intron_maturas2 HNHc PRK13732 Feature: gene Location: 19375-19581 bp Feature: gene Location: 19915-20124 bp Feature: gene Location: 20259-22160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20526-21357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20526-21 357 bp Feature: domain Description: Intron_maturas2 Location: 21471-21729 bp Feature: domain Description: Intron_maturas2 Location: 21 471 -21 729 bp Feature: domain Description: HNHc Note: nucleases Location: 21903-22065 bp Feature: domain Description: HNHc Note: nucleases Location: 21 903-22065 bp Feature: gene Location: 22355-22597 bp Feature: domain Description: PRK13732 Location: 22361-22583 bp Feature: domain Description: PRK1 3732 Location: 22361 -22583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional)

Seq: RZFX01000220.1 (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RZFX01000123.1 (12854 bp)
Overview 1 RT 1: 714-4958 bp Neighborhood of RT #1 [714, 4958] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 714-1616 bp Feature: domain Description: Macro_Appr_pase Location: 732-1245 bp Feature: domain Description: Macro_Appr_pase Location: 73 2-1245 bp Feature: gene Location: 1625-2209 bp Feature: domain Description: Caudo_TAP Location: 1841-2198 bp Feature: domain Description: Caudo_TAP Location: 1841-2198 bp Feature: gene Location: 2322-3692 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2550-3156 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2550-3 156 bp Feature: gene Location: 3670-4374 bp Feature: domain Description: SLATT_5 Location: 3832-4342 bp Feature: domain Description: SLATT_5 Location: 3 83 2-43 42 bp Feature: gene Location: 4782-4958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: CM017182.1 (157385 bp)
Overview 1 RT 1: 42853-46565 bp 2 RT 2: 127389-131764 bp Neighborhood of RT #1 [42853, 46630] autotrans_barl PHA02517 RVT-GII GIIM PHA02517 Neighborhood of RT #2 [127389, 131764] Rve PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 42853-43470 bp Feature: domain Description: autotrans_barl Location: 42976-43417 bp Feature: domain Description: autotrans_barl Location: 4 2976-4 34 17 bp Feature: gene Location: 43473-43919 bp Feature: domain Description: PHA02517 Location: 43476-43917 bp Feature: domain Description: PHA02517 Location: 4 34 76-4 3917 bp Feature: gene Location: 44036-45559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 44309-45041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 309-4 504 1 bp Feature: domain Description: GIIM Note: maturase Location: 45116-45314 bp Feature: domain Description: GIIM Note: maturase Location: 4 5116-4 5314 bp Feature: gene Location: 45513-45938 bp Feature: gene Location: 46151-46630 bp Feature: domain Description: PHA02517 Location: 46211-46565 bp Feature: domain Description: PHA02517 Location: 4 6211-4 6565 bp Feature: gene Location: 127389-128105 bp Feature: domain Description: Rve Location: 127404-128049 bp Feature: domain Description: Rve Location: 1274 04 -12804 9 bp Feature: gene Location: 128139-128381 bp Feature: domain Description: PRK13732 Location: 128145-128367 bp Feature: domain Description: PRK13732 Location: 12814 5-128367 bp Feature: gene Location: 128576-130477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128843-129674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12884 3-129674 bp Feature: domain Description: Intron_maturas2 Location: 129788-130046 bp Feature: domain Description: Intron_maturas2 Location: 129788-13004 6 bp Feature: domain Description: HNHc Note: nucleases Location: 130220-130382 bp Feature: domain Description: HNHc Note: nucleases Location: 130220-130382 bp Feature: gene Location: 131219-131422 bp Feature: gene Location: 131474-131764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), Rve (COG3316), PRK13732 (single-stranded DNA-binding protein; Provisional), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZFX01000238.1 (1626 bp)
Overview 1 RT 1: 2-692 bp Neighborhood of RT #1 [2, 1624] RVT-Retrons Feature: gene Location: 2-1624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74-692 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74-692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons