myRT

myRT report for GCA_004567865.1_ASM456786v1

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Seq: RZDG01000072.1 (11455 bp)
Overview 1 RT 1: 10371-11292 bp Neighborhood of RT #1 [10371, 11453] PRK10173 PRK10173 RVT-GII Feature: gene Location: 10371-10820 bp Feature: domain Description: PRK10173 Location: 10374-10812 bp Feature: domain Description: PRK1 01 73 Location: 1 0374-1 081 2 bp Feature: gene Location: 10804-11115 bp Feature: domain Description: PRK10173 Location: 10807-11026 bp Feature: domain Description: PRK1 01 73 Location: 1 0807-1 1 026 bp Feature: gene Location: 11154-11453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11223-11292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 223-1 1 292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: RZDG01000076.1 (10481 bp)
Overview 1 RT 1: 1952-4364 bp Neighborhood of RT #1 [1952, 4438] PHA02517 InsE RVT-GII RVT-GII group_II_RT_mat IS285 Feature: gene Location: 1952-2653 bp Feature: domain Description: PHA02517 Location: 1970-2648 bp Feature: domain Description: PHA02 517 Location: 1970-2 648 bp Feature: gene Location: 2794-3096 bp Feature: domain Description: InsE Location: 2797-3082 bp Feature: domain Description: InsE Location: 2 797-3082 bp Feature: gene Location: 3135-3338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3180-3336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3180-3336 bp Feature: gene Location: 3372-3608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3375-3555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3375-3555 bp Feature: gene Location: 3601-3813 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3604-3802 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3604-3802 bp Feature: gene Location: 3956-4438 bp Feature: domain Description: IS285 Location: 3986-4364 bp Feature: domain Description: IS2 85 Location: 3986-4364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)

Seq: RZDG01000012.1 (121998 bp)
Overview 1 RT 1: 108832-114559 bp Neighborhood of RT #1 [108832, 114801] YeeP RVT-UG1 GerD Feature: gene Location: 108832-109017 bp Feature: gene Location: 109194-110066 bp Feature: domain Description: YeeP Location: 109197-110064 bp Feature: domain Description: YeeP Location: 109197-110064 bp Feature: gene Location: 110670-113141 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 111282-111792 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 111282-111792 bp Feature: gene Location: 113243-114358 bp Feature: gene Location: 114367-114801 bp Feature: domain Description: GerD Location: 114445-114559 bp Feature: domain Description: GerD Location: 114445-114559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-UG1, GerD (pfam17898)

Seq: RZDG01000068.1 (12694 bp)
Overview 1 RT 1: 2-1508 bp Neighborhood of RT #1 [2, 1573] RVT-GII PHA02517 Feature: gene Location: 2-556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-551 bp Feature: gene Location: 510-935 bp Feature: gene Location: 1148-1573 bp Feature: domain Description: PHA02517 Location: 1172-1508 bp Feature: domain Description: PHA02517 Location: 1172-1508 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: RZDG01000036.1 (52218 bp)
Overview 1 RT 1: 3-2023 bp Neighborhood of RT #1 [3, 2023] RVT-Retrons Feature: gene Location: 3-1250 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15-369 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15 -369 bp Feature: gene Location: 1384-1659 bp Feature: gene Location: 1880-2023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons