myRT

myRT report for GCA_004568235.1_ASM456823v1

Download annotations/find similar RTs

Seq: RZDI01000112.1 (8383 bp)
Overview 1 RT 1: 2-2785 bp Neighborhood of RT #1 [2, 2785] RVT-Retrons Feature: gene Location: 2-1411 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5-416 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5-41 6 bp Feature: gene Location: 1433-1600 bp Feature: gene Location: 1646-2785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZDI01000069.1 (24885 bp)
Overview 1 RT 1: 19386-23114 bp Neighborhood of RT #1 [19386, 23119] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 19386-19592 bp Feature: gene Location: 19926-20135 bp Feature: gene Location: 20270-22171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20537-21368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0537-2 1368 bp Feature: domain Description: Intron_maturas2 Location: 21482-21740 bp Feature: domain Description: Intron_maturas2 Location: 2 1482 -2 1740 bp Feature: domain Description: HNHc Note: nucleases Location: 21914-22076 bp Feature: domain Description: HNHc Note: nucleases Location: 2 1914-2 2 076 bp Feature: gene Location: 22366-22818 bp Feature: domain Description: PRK13732 Location: 22372-22816 bp Feature: domain Description: PRK13732 Location: 2 2 372 -2 2 816 bp Feature: gene Location: 22886-23119 bp Feature: domain Description: DUF905 Location: 22916-23114 bp Feature: domain Description: DUF905 Location: 2 2 916-2 3114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: RZDI01000043.1 (41352 bp)
Overview 1 RT 1: 2-1081 bp Neighborhood of RT #1 [2, 1081] RVT-Retrons Feature: gene Location: 2-286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 161-248 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 161-248 bp Feature: gene Location: 507-650 bp Feature: gene Location: 842-1081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZDI01000089.1 (13923 bp)
Overview 1 RT 1: 10434-13855 bp Neighborhood of RT #1 [10434, 13920] autotrans_barl PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 10434-11051 bp Feature: domain Description: autotrans_barl Location: 10557-10998 bp Feature: domain Description: autotrans_barl Location: 10557-10998 bp Feature: gene Location: 11054-11500 bp Feature: domain Description: PHA02517 Location: 11057-11498 bp Feature: domain Description: PHA02517 Location: 11057-114 98 bp Feature: gene Location: 11617-13140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11890-12622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11890-12622 bp Feature: domain Description: GIIM Note: maturase Location: 12697-12895 bp Feature: domain Description: GIIM Note: maturase Location: 12697-12895 bp Feature: gene Location: 13094-13519 bp Feature: gene Location: 13732-13920 bp Feature: domain Description: PHA02517 Location: 13735-13855 bp Feature: domain Description: PHA02517 Location: 13735-13855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: RZDI01000114.1 (7842 bp)
Overview 1 RT 1: 5216-7316 bp Neighborhood of RT #1 [5216, 7840] SLATT_5 RVT-UG17 Feature: gene Location: 5216-5392 bp Feature: gene Location: 5800-6504 bp Feature: domain Description: SLATT_5 Location: 5962-6472 bp Feature: domain Description: SLATT_5 Location: 5 962-6472 bp Feature: gene Location: 6482-7840 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6710-7316 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6710-7316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17