myRT

myRT report for GCA_004568425.1_ASM456842v1

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Seq: RZCG01000011.1 (181048 bp)
Overview 1 RT 1: 78670-82611 bp Neighborhood of RT #1 [78670, 82611] RVT-Retrons Feature: gene Location: 78670-78909 bp Feature: gene Location: 79216-79392 bp Feature: gene Location: 79465-81237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: gene Location: 81259-81426 bp Feature: gene Location: 81472-82611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZCG01000071.1 (2663 bp)
Overview 1 RT 1: 270-2420 bp Neighborhood of RT #1 [270, 2515] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 270-479 bp Feature: gene Location: 614-2515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881-1712 bp Feature: domain Description: Intron_maturas2 Location: 1826-2084 bp Feature: domain Description: Intron_maturas2 Location: 182 6-2 084 bp Feature: domain Description: HNHc Note: nucleases Location: 2258-2420 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 58-2 42 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZCG01000048.1 (13380 bp)
Overview 1 RT 1: 1943-6187 bp Neighborhood of RT #1 [1943, 6187] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 1943-2845 bp Feature: domain Description: Macro_Appr_pase Location: 1961-2474 bp Feature: domain Description: Macro_Appr_pase Location: 1961-2474 bp Feature: gene Location: 2854-3438 bp Feature: domain Description: Caudo_TAP Location: 3070-3427 bp Feature: domain Description: Caudo_TAP Location: 3 070-3 427 bp Feature: gene Location: 3551-4921 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3779-4385 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3 779-43 85 bp Feature: gene Location: 4899-5603 bp Feature: domain Description: SLATT_5 Location: 5061-5571 bp Feature: domain Description: SLATT_5 Location: 5061-5571 bp Feature: gene Location: 6011-6187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)