myRT

myRT report for GCA_004568495.1_ASM456849v1

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Seq: RZCB01000043.1 (13380 bp)
Overview 1 RT 1: 1943-6187 bp Neighborhood of RT #1 [1943, 6187] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 1943-2845 bp Feature: domain Description: Macro_Appr_pase Location: 1961-2474 bp Feature: domain Description: Macro_Appr_pase Location: 1 961 -2474 bp Feature: gene Location: 2854-3438 bp Feature: domain Description: Caudo_TAP Location: 3070-3427 bp Feature: domain Description: Caudo_TAP Location: 3070-3427 bp Feature: gene Location: 3551-4921 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3779-4385 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3779-4385 bp Feature: gene Location: 4899-5603 bp Feature: domain Description: SLATT_5 Location: 5061-5571 bp Feature: domain Description: SLATT_5 Location: 5061 -5571 bp Feature: gene Location: 6011-6187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: RZCB01000009.1 (181048 bp)
Overview 1 RT 1: 98438-102379 bp Neighborhood of RT #1 [98438, 102379] RVT-Retrons Feature: gene Location: 98438-99577 bp Feature: gene Location: 99623-99790 bp Feature: gene Location: 99812-101584 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99971-100589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99971-100589 bp Feature: gene Location: 101805-101948 bp Feature: gene Location: 102140-102379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZCB01000034.1 (24874 bp)
Overview 1 RT 1: 19375-23103 bp Neighborhood of RT #1 [19375, 23108] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 19375-19581 bp Feature: gene Location: 19915-20124 bp Feature: gene Location: 20259-22160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20526-21357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20526-213 57 bp Feature: domain Description: Intron_maturas2 Location: 21471-21729 bp Feature: domain Description: Intron_maturas2 Location: 21471-21729 bp Feature: domain Description: HNHc Note: nucleases Location: 21903-22065 bp Feature: domain Description: HNHc Note: nucleases Location: 21903 -22065 bp Feature: gene Location: 22355-22807 bp Feature: domain Description: PRK13732 Location: 22361-22805 bp Feature: domain Description: PRK13 73 2 Location: 223 61-22805 bp Feature: gene Location: 22875-23108 bp Feature: domain Description: DUF905 Location: 22905-23103 bp Feature: domain Description: DUF905 Location: 22905-23 103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)