myRT

myRT report for GCA_004568795.1_ASM456879v1

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Seq: RZBN01000082.1 (2524 bp)
Overview 1 RT 1: 3-2466 bp Neighborhood of RT #1 [3, 2466] RVT-GII GIIM Feature: gene Location: 3-131 bp Feature: gene Location: 218-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 -1 223 bp Feature: domain Description: GIIM Note: maturase Location: 1298-1496 bp Feature: domain Description: GIIM Note: maturase Location: 1 298-1 496 bp Feature: gene Location: 2035-2466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RZBN01000052.1 (12795 bp)
Overview 1 RT 1: 1358-5602 bp Neighborhood of RT #1 [1358, 5602] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 1358-2260 bp Feature: domain Description: Macro_Appr_pase Location: 1376-1889 bp Feature: domain Description: Macro_Appr_pase Location: 1376-1889 bp Feature: gene Location: 2269-2853 bp Feature: domain Description: Caudo_TAP Location: 2485-2842 bp Feature: domain Description: Caudo_TAP Location: 2 485-2 842 bp Feature: gene Location: 2966-4336 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3194-3800 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3194-3800 bp Feature: gene Location: 4314-5018 bp Feature: domain Description: SLATT_5 Location: 4476-4986 bp Feature: domain Description: SLATT_5 Location: 4476-4986 bp Feature: gene Location: 5426-5602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: RZBN01000011.1 (175773 bp)
Overview 1 RT 1: 78670-82611 bp Neighborhood of RT #1 [78670, 82611] RVT-Retrons Feature: gene Location: 78670-78909 bp Feature: gene Location: 79216-79392 bp Feature: gene Location: 79465-81237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: gene Location: 81259-81426 bp Feature: gene Location: 81472-82611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZBN01000038.1 (22683 bp)
Overview 1 RT 1: 19374-22564 bp Neighborhood of RT #1 [19374, 22680] RVT-GII Intron_maturas2 HNHc PRK13732 Feature: gene Location: 19374-19580 bp Feature: gene Location: 19914-20123 bp Feature: gene Location: 20258-22159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20525-21356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20525-21356 bp Feature: domain Description: Intron_maturas2 Location: 21470-21728 bp Feature: domain Description: Intron_maturas2 Location: 214 70-21728 bp Feature: domain Description: HNHc Note: nucleases Location: 21902-22064 bp Feature: domain Description: HNHc Note: nucleases Location: 21902-22064 bp Feature: gene Location: 22354-22680 bp Feature: domain Description: PRK13732 Location: 22360-22564 bp Feature: domain Description: PRK13732 Location: 22360-22564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional)