myRT

myRT report for GCA_004568895.1_ASM456889v1

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Seq: RZAJ01000010.1 (181048 bp)
Overview 1 RT 1: 98438-102379 bp Neighborhood of RT #1 [98438, 102379] RVT-Retrons Feature: gene Location: 98438-99577 bp Feature: gene Location: 99623-99790 bp Feature: gene Location: 99812-101584 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99971-100589 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 99971 -1 00589 bp Feature: gene Location: 101805-101948 bp Feature: gene Location: 102140-102379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZAJ01000040.1 (12795 bp)
Overview 1 RT 1: 1358-5602 bp Neighborhood of RT #1 [1358, 5602] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 1358-2260 bp Feature: domain Description: Macro_Appr_pase Location: 1376-1889 bp Feature: domain Description: Macro_Appr_pase Location: 1376-1889 bp Feature: gene Location: 2269-2853 bp Feature: domain Description: Caudo_TAP Location: 2485-2842 bp Feature: domain Description: Caudo_TAP Location: 2 485-2 842 bp Feature: gene Location: 2966-4336 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3194-3800 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3194-3800 bp Feature: gene Location: 4314-5018 bp Feature: domain Description: SLATT_5 Location: 4476-4986 bp Feature: domain Description: SLATT_5 Location: 4476-4986 bp Feature: gene Location: 5426-5602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: RZAJ01000032.1 (22704 bp)
Overview 1 RT 1: 109-3734 bp Neighborhood of RT #1 [109, 3734] PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 109-351 bp Feature: domain Description: PRK13732 Location: 115-337 bp Feature: domain Description: PRK13 73 2 Location: 115-3 3 7 bp Feature: gene Location: 546-2447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 813-1644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 813 -1644 bp Feature: domain Description: Intron_maturas2 Location: 1758-2016 bp Feature: domain Description: Intron_maturas2 Location: 1758-2016 bp Feature: domain Description: HNHc Note: nucleases Location: 2190-2352 bp Feature: domain Description: HNHc Note: nucleases Location: 2190-23 52 bp Feature: gene Location: 3189-3392 bp Feature: gene Location: 3444-3734 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RZAJ01000052.1 (2524 bp)
Overview 1 RT 1: 1-2062 bp Neighborhood of RT #1 [1, 2307] RVT-GII GIIM Feature: gene Location: 1-153 bp Feature: gene Location: 784-2307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1057-1789 bp Feature: domain Description: GIIM Note: maturase Location: 1864-2062 bp Feature: domain Description: GIIM Note: maturase Location: 1864 -2062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: CM017048.1 (96844 bp)
Overview 1 RT 1: 66848-71223 bp Neighborhood of RT #1 [66848, 71223] Rve PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 66848-67564 bp Feature: domain Description: Rve Location: 66863-67508 bp Feature: domain Description: Rve Location: 66863-675 08 bp Feature: gene Location: 67598-67840 bp Feature: domain Description: PRK13732 Location: 67604-67826 bp Feature: domain Description: PRK13732 Location: 67604-67826 bp Feature: gene Location: 68035-69936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68302-69133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68302-69133 bp Feature: domain Description: Intron_maturas2 Location: 69247-69505 bp Feature: domain Description: Intron_maturas2 Location: 69247-695 05 bp Feature: domain Description: HNHc Note: nucleases Location: 69679-69841 bp Feature: domain Description: HNHc Note: nucleases Location: 69679-69841 bp Feature: gene Location: 70678-70881 bp Feature: gene Location: 70933-71223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)