myRT

myRT report for GCA_004569015.1_ASM456901v1

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Seq: RZCA01000012.1 (181048 bp)
Overview 1 RT 1: 78670-82611 bp Neighborhood of RT #1 [78670, 82611] RVT-Retrons Feature: gene Location: 78670-78909 bp Feature: gene Location: 79216-79392 bp Feature: gene Location: 79465-81237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 79624-80242 bp Feature: gene Location: 81259-81426 bp Feature: gene Location: 81472-82611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RZCA01000037.1 (13380 bp)
Overview 1 RT 1: 1943-6187 bp Neighborhood of RT #1 [1943, 6187] Macro_Appr_pase Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 1943-2845 bp Feature: domain Description: Macro_Appr_pase Location: 1961-2474 bp Feature: domain Description: Macro_Appr_pase Location: 1961-2 474 bp Feature: gene Location: 2854-3438 bp Feature: domain Description: Caudo_TAP Location: 3070-3427 bp Feature: domain Description: Caudo_TAP Location: 3070-342 7 bp Feature: gene Location: 3551-4921 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3779-4385 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3779-4385 bp Feature: gene Location: 4899-5603 bp Feature: domain Description: SLATT_5 Location: 5061-5571 bp Feature: domain Description: SLATT_5 Location: 5061-5571 bp Feature: gene Location: 6011-6187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Macro_Appr_pase (cd02900), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)

Seq: RZCA01000032.1 (18555 bp)
Overview 1 RT 1: 13056-16784 bp Neighborhood of RT #1 [13056, 16789] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 13056-13262 bp Feature: gene Location: 13596-13805 bp Feature: gene Location: 13940-15841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14207-15038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14207-1503 8 bp Feature: domain Description: Intron_maturas2 Location: 15152-15410 bp Feature: domain Description: Intron_maturas2 Location: 15152-15410 bp Feature: domain Description: HNHc Note: nucleases Location: 15584-15746 bp Feature: domain Description: HNHc Note: nucleases Location: 15584-15746 bp Feature: gene Location: 16036-16488 bp Feature: domain Description: PRK13732 Location: 16042-16486 bp Feature: domain Description: PRK13 73 2 Location: 16042-16486 bp Feature: gene Location: 16556-16789 bp Feature: domain Description: DUF905 Location: 16586-16784 bp Feature: domain Description: DUF905 Location: 16586-16784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)