myRT

myRT report for GCA_004569485.1_ASM456948v1

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Seq: SPPV01000015.1 (88277 bp)
Overview 1 RT 1: 1462-5541 bp Neighborhood of RT #1 [1462, 5555] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 1462-1809 bp Feature: gene Location: 1855-2226 bp Feature: gene Location: 2445-3857 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2835-3537 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2835-3537 bp Feature: gene Location: 3865-4221 bp Feature: domain Description: Avd_like Location: 3892-4201 bp Feature: domain Description: Avd_like Location: 3892-4201 bp Feature: gene Location: 4263-5555 bp Feature: domain Description: DUF1566 Location: 5283-5541 bp Feature: domain Description: DUF1 566 Location: 5283-5541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000022.1 (74537 bp)
Overview 1 RT 1: 26853-30502 bp Neighborhood of RT #1 [26853, 30502] RVT-DGRs Feature: gene Location: 26853-27233 bp Feature: gene Location: 27230-27658 bp Feature: gene Location: 27621-28808 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 27954-28581 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 7954-2 8581 bp Feature: gene Location: 28930-29067 bp Feature: gene Location: 29141-30502 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000006.1 (135043 bp)
Overview 1 RT 1: 78955-82487 bp Neighborhood of RT #1 [78955, 82487] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 78955-79764 bp Feature: domain Description: DUF1566 Location: 79486-79735 bp Feature: domain Description: DUF1566 Location: 79486-7973 5 bp Feature: gene Location: 79911-80318 bp Feature: domain Description: Avd_like Location: 79944-80253 bp Feature: domain Description: Avd_like Location: 79944-80253 bp Feature: gene Location: 80333-81754 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 80708-81410 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 80708-81410 bp Feature: gene Location: 81717-81995 bp Feature: gene Location: 82194-82487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000043.1 (37971 bp)
Overview 1 RT 1: 2359-7953 bp Neighborhood of RT #1 [2359, 8306] RVT-DGRs SMC_prok_B Feature: gene Location: 2359-3111 bp Feature: gene Location: 3345-3719 bp Feature: gene Location: 3729-5072 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3936-4527 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3936-4 527 bp Feature: gene Location: 5570-7039 bp Feature: gene Location: 7053-8306 bp Feature: domain Description: SMC_prok_B Location: 7182-7953 bp Feature: domain Description: SMC_prok_B Location: 7182-7953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000020.1 (80659 bp)
Overview 1 RT 1: 9787-21177 bp Neighborhood of RT #1 [9787, 21200] rpoB PRK00566 RVT-GII FecR Feature: gene Location: 9787-13599 bp Feature: domain Description: rpoB Location: 9808-13594 bp Feature: domain Description: rpoB Location: 9808-135 94 bp Feature: gene Location: 13705-17988 bp Feature: domain Description: PRK00566 Location: 13726-17947 bp Feature: domain Description: PRK005 66 Location: 13726-17947 bp Feature: gene Location: 18464-19357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18788-19352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18788-1935 2 bp Feature: gene Location: 19426-19572 bp Feature: gene Location: 20085-21200 bp Feature: domain Description: FecR Location: 20595-21177 bp Feature: domain Description: FecR Location: 205 95 -21177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000016.1 (88233 bp)
Overview 1 RT 1: 58280-70844 bp Neighborhood of RT #1 [58280, 70873] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF3876 DUF4141 RVT_N RVT-GII GIIM Bac_Flav_CT_J Feature: gene Location: 58280-58516 bp Feature: domain Description: DUF4134 Location: 58325-58502 bp Feature: domain Description: DUF4134 Location: 58325-58502 bp Feature: gene Location: 58599-58850 bp Feature: gene Location: 59132-60787 bp Feature: domain Description: RVT_N Location: 59189-59426 bp Feature: domain Description: RVT_N Location: 59189-59426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59477-60125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59477-6 0125 bp Feature: domain Description: GIIM Note: maturase Location: 60182-60413 bp Feature: domain Description: GIIM Note: maturase Location: 6 0182-6 0413 bp Feature: gene Location: 60784-61026 bp Feature: domain Description: DUF4134 Location: 60931-61021 bp Feature: domain Description: DUF4134 Location: 6 0931-6 1021 bp Feature: gene Location: 61038-61370 bp Feature: domain Description: DUF4133 Location: 61056-61326 bp Feature: domain Description: DUF4133 Location: 6 1056 -6 1326 bp Feature: gene Location: 61367-63766 bp Feature: domain Description: Bac_Flav_CT_G Location: 61370-63758 bp Feature: domain Description: Bac_Flav_CT_G Location: 6 1370-6 3758 bp Feature: gene Location: 64335-66158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64599-65421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 4599-6 5421 bp Feature: domain Description: Intron_maturas2 Location: 65595-65838 bp Feature: domain Description: Intron_maturas2 Location: 6 5595-6 5838 bp Feature: domain Description: HNHc Note: nucleases Location: 65949-66120 bp Feature: domain Description: HNHc Note: nucleases Location: 6 5949-6 6 120 bp Feature: gene Location: 66411-66797 bp Feature: domain Description: DUF3876 Location: 66498-66762 bp Feature: domain Description: DUF3876 Location: 6 6 498-6 6 76 2 bp Feature: gene Location: 66821-67033 bp Feature: domain Description: DUF4141 Location: 66833-66989 bp Feature: domain Description: DUF4141 Location: 6 6 833-6 6 989 bp Feature: gene Location: 67327-67479 bp Feature: gene Location: 67657-69339 bp Feature: domain Description: RVT_N Location: 67711-67954 bp Feature: domain Description: RVT_N Location: 6 7711-6 7954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67999-68653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6 7999-6 86 53 bp Feature: domain Description: GIIM Note: maturase Location: 68707-68938 bp Feature: domain Description: GIIM Note: maturase Location: 6 8707-6 8938 bp Feature: gene Location: 69323-69865 bp Feature: gene Location: 69869-70873 bp Feature: domain Description: Bac_Flav_CT_J Location: 69875-70844 bp Feature: domain Description: Bac_Flav_CT_J Location: 6 9875-70844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000013.1 (90983 bp)
Overview 1 RT 1: 20897-24945 bp 2 RT 2: 41874-45708 bp Neighborhood of RT #1 [20897, 24950] Bac_Flav_CT_N RVT-GII Intron_maturas2 Bac_Flav_CT_N TraO Neighborhood of RT #2 [41874, 45708] Phage_holin_4_1 RVT-DGRs Feature: gene Location: 20897-21322 bp Feature: domain Description: Bac_Flav_CT_N Location: 20900-21302 bp Feature: domain Description: Bac_Flav_CT_N Location: 20900-21302 bp Feature: gene Location: 21341-21829 bp Feature: gene Location: 21864-23675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22128-22950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22128-22950 bp Feature: domain Description: Intron_maturas2 Location: 23022-23331 bp Feature: domain Description: Intron_maturas2 Location: 23022-23331 bp Feature: gene Location: 23665-24372 bp Feature: domain Description: Bac_Flav_CT_N Location: 23788-24349 bp Feature: domain Description: Bac_Flav_CT_N Location: 237 88-24349 bp Feature: gene Location: 24375-24950 bp Feature: domain Description: TraO Location: 24450-24945 bp Feature: domain Description: TraO Location: 24450-24945 bp Feature: gene Location: 41874-42344 bp Feature: domain Description: Phage_holin_4_1 Location: 41961-42273 bp Feature: domain Description: Phage_holin_4_1 Location: 41961-4227 3 bp Feature: gene Location: 42346-42717 bp Feature: gene Location: 42695-43729 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42905-43517 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 42905-43517 bp Feature: gene Location: 43986-44330 bp Feature: gene Location: 44374-45708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000100.1 (8490 bp)
Overview 1 RT 1: 5272-8413 bp Neighborhood of RT #1 [5272, 8413] CcmA RVT-GII group_II_RT_mat Feature: gene Location: 5272-6102 bp Feature: gene Location: 6109-7056 bp Feature: domain Description: CcmA Location: 6214-6964 bp Feature: domain Description: CcmA Location: 6214-6964 bp Feature: gene Location: 7142-7930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7184-7799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 718 4-7799 bp Feature: gene Location: 7923-8135 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8001-8124 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 8 001-8 124 bp Feature: gene Location: 8282-8413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SPPV01000019.1 (85478 bp)
Overview 1 RT 1: 55052-60062 bp Neighborhood of RT #1 [55052, 60062] Cupin_2 HxlR RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 55052-55501 bp Feature: domain Description: Cupin_2 Location: 55220-55427 bp Feature: domain Description: Cupin_2 Location: 55220-55427 bp Feature: gene Location: 55686-56069 bp Feature: domain Description: HxlR Location: 55707-56049 bp Feature: domain Description: HxlR Location: 55707-56049 bp Feature: gene Location: 56211-57503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56421-57078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56421-57078 bp Feature: domain Description: GIIM Note: maturase Location: 57156-57363 bp Feature: domain Description: GIIM Note: maturase Location: 57156-57363 bp Feature: gene Location: 57827-58057 bp Feature: gene Location: 58082-59350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58295-58952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5829 5-589 52 bp Feature: domain Description: GIIM Note: maturase Location: 59033-59240 bp Feature: domain Description: GIIM Note: maturase Location: 59 033-59 240 bp Feature: gene Location: 59527-59865 bp Feature: gene Location: 59913-60062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT