myRT

myRT report for GCA_004569855.1_ASM456985v1

Download annotations/find similar RTs

Seq: RZAH01000017.1 (6419 bp)
Overview 1 RT 1: 2-4140 bp Neighborhood of RT #1 [2, 4169] RVT-GII RVT-GII FHA_bHelix fil_hemag_20aa FHA_bHelix FHA_bHelix Feature: gene Location: 2-169 bp Feature: gene Location: 541-744 bp Feature: gene Location: 1151-1525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1157-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 57-1 328 bp Feature: gene Location: 1541-2353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1814-2270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 4-2270 bp Feature: gene Location: 2474-2677 bp Feature: gene Location: 2964-4169 bp Feature: domain Description: FHA_bHelix Location: 2982-3213 bp Feature: domain Description: FHA_bHelix Location: 2982-321 3 bp Feature: domain Description: fil_hemag_20aa Location: 3216-3336 bp Feature: domain Description: fil_hemag_20aa Location: 321 6-3336 bp Feature: domain Description: FHA_bHelix Location: 3447-3813 bp Feature: domain Description: FHA_bHelix Location: 3447-381 3 bp Feature: domain Description: FHA_bHelix Location: 4032-4140 bp Feature: domain Description: FHA_bHelix Location: 4032-41 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, FHA_bHelix (sd00046), fil_hemag_20aa (TIGR01731)

Seq: RZAH01000016.1 (16031 bp)
Overview 1 RT 1: 13693-15812 bp Neighborhood of RT #1 [13693, 15853] DDE_Tnp_IS66_C GIIM RVT-GII DDE_Tnp_IS66 Feature: gene Location: 13693-13839 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13705-13816 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 13705-13816 bp Feature: gene Location: 13956-14327 bp Feature: domain Description: GIIM Note: maturase Location: 14028-14250 bp Feature: domain Description: GIIM Note: maturase Location: 1402 8-142 50 bp Feature: gene Location: 14476-15186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14677-15178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14677-15178 bp Feature: gene Location: 15181-15600 bp Feature: gene Location: 15638-15853 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15653-15812 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15653-15812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388), RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: RZAH01000014.1 (35194 bp)
Overview 1 RT 1: 15122-19237 bp Neighborhood of RT #1 [15122, 19237] rve_2 RVT-GII GIIM InsG Transposase_20 Feature: gene Location: 15122-15274 bp Feature: domain Description: rve_2 Location: 15152-15260 bp Feature: domain Description: rve_2 Location: 15152-15260 bp Feature: gene Location: 15547-15852 bp Feature: gene Location: 15895-17283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16225-16843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16225-16843 bp Feature: domain Description: GIIM Note: maturase Location: 16891-17122 bp Feature: domain Description: GIIM Note: maturase Location: 16891-17122 bp Feature: gene Location: 17670-19061 bp Feature: domain Description: InsG Location: 17673-18594 bp Feature: domain Description: InsG Location: 17673 -18594 bp Feature: domain Description: Transposase_20 Location: 18717-18963 bp Feature: domain Description: Transposase_20 Location: 18717-18963 bp Feature: gene Location: 19070-19237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_2 (pfam13333), RVT-GII, GIIM (pfam08388), InsG (COG3385), Transposase_20 (pfam02371)