myRT

myRT report for GCA_004684005.1_ASM468400v1

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Seq: SRHD01000005.1 (46399 bp)
Overview 1 RT 1: 44372-46179 bp Neighborhood of RT #1 [44372, 46397] PRK01103 RVT-GII GIIM Feature: gene Location: 44372-45181 bp Feature: domain Description: PRK01103 Location: 44375-45179 bp Feature: domain Description: PRK01 1 03 Location: 44375-451 79 bp Feature: gene Location: 45206-45685 bp Feature: gene Location: 45795-46397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45801-45918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45801 -4591 8 bp Feature: domain Description: GIIM Note: maturase Location: 45969-46179 bp Feature: domain Description: GIIM Note: maturase Location: 45969-461 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01103 (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase), RVT-GII, GIIM (pfam08388)

Seq: SRHD01000556.1 (441 bp)
Overview 1 RT 1: 112-379 bp Neighborhood of RT #1 [112, 393] RVT-GII Feature: gene Location: 112-393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 -379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SRHD01000602.1 (278 bp)
Overview 1 RT 1: 2-275 bp Neighborhood of RT #1 [2, 277] RVT-GII Feature: gene Location: 2-277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-275 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SRHD01000206.1 (6033 bp)
Overview 1 RT 1: 2268-5512 bp Neighborhood of RT #1 [2268, 5964] INT_ICEBs1_C_like COG5340 RVT-UG1 Feature: gene Location: 2268-3359 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2640-3165 bp Feature: domain Description: INT_ICEBs1_C_like Location: 264 0-3165 bp Feature: gene Location: 3749-4273 bp Feature: domain Description: COG5340 Location: 3776-4124 bp Feature: domain Description: COG534 0 Location: 3776-4 124 bp Feature: gene Location: 4402-5964 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5023-5512 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5023-5512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG1