myRT

myRT report for GCA_004684135.1_ASM468413v1

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Seq: SRIQ01000157.1 (2344 bp)
Overview 1 RT 1: 83-2212 bp Neighborhood of RT #1 [83, 2212] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 83-1750 bp Feature: domain Description: RVT_N Location: 131-368 bp Feature: domain Description: RVT_N Location: 1 31 -368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 9-1 061 bp Feature: domain Description: GIIM Note: maturase Location: 1112-1346 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 2-1 346 bp Feature: domain Description: HNHc Note: nucleases Location: 1556-1715 bp Feature: domain Description: HNHc Note: nucleases Location: 1 556-1 71 5 bp Feature: gene Location: 2030-2212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: SRIQ01000025.1 (144579 bp)
Overview 1 RT 1: 83032-93509 bp Neighborhood of RT #1 [83032, 93628] COG4688 COG4688 RVT-UG3 RVT-UG8 BRR2 BRR2 DUF1837 Feature: gene Location: 83032-85065 bp Feature: domain Description: COG4688 Location: 83035-83941 bp Feature: domain Description: COG4688 Location: 83035-83941 bp Feature: domain Description: COG4688 Location: 84316-85039 bp Feature: domain Description: COG4688 Location: 84316-85039 bp Feature: gene Location: 85058-85477 bp Feature: gene Location: 85529-86878 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 85985-86462 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 85985-86462 bp Feature: gene Location: 86871-88913 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 87483-87930 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 87483-87930 bp Feature: gene Location: 89641-92796 bp Feature: domain Description: BRR2 Location: 90364-90940 bp Feature: domain Description: BRR2 Location: 90364-90940 bp Feature: domain Description: BRR2 Location: 91375-91621 bp Feature: domain Description: BRR2 Location: 91375-9162 1 bp Feature: gene Location: 92786-93628 bp Feature: domain Description: DUF1837 Location: 93038-93509 bp Feature: domain Description: DUF1837 Location: 93038-93509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4688 (Uncharacterized protein ), RVT-UG3, RVT-UG8, BRR2 (COG1204), DUF1837 (pfam08878)

Seq: SRIQ01000018.1 (77099 bp)
Overview 1 RT 1: 73087-76173 bp Neighborhood of RT #1 [73087, 76214] RVT-Retrons Arm-DNA-bind_3 Feature: gene Location: 73087-73236 bp Feature: gene Location: 73537-74523 bp Feature: gene Location: 74525-75457 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74627-75221 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74627-75221 bp Feature: gene Location: 75483-75728 bp Feature: gene Location: 75912-76214 bp Feature: domain Description: Arm-DNA-bind_3 Location: 75921-76173 bp Feature: domain Description: Arm-DNA-bind_3 Location: 75921-76173 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356)