myRT

myRT report for GCA_004685025.1_ASM468502v1

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Seq: SRKC01000013.1 (9906 bp)
Overview 1 RT 1: 3752-9758 bp Neighborhood of RT #1 [3752, 9805] mutL RVT-GII GIIM RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3752-5542 bp Feature: domain Description: mutL Location: 3755-5537 bp Feature: domain Description: mutL Location: 3755-5537 bp Feature: gene Location: 6014-6163 bp Feature: gene Location: 6207-7454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6411-7068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 641 1 -7068 bp Feature: domain Description: GIIM Note: maturase Location: 7152-7377 bp Feature: domain Description: GIIM Note: maturase Location: 71 52-7377 bp Feature: gene Location: 8012-9805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8279-9068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8279-9068 bp Feature: domain Description: Intron_maturas2 Location: 9161-9422 bp Feature: domain Description: Intron_maturas2 Location: 91 61 -9422 bp Feature: domain Description: HNHc Note: nucleases Location: 9578-9758 bp Feature: domain Description: HNHc Note: nucleases Location: 9578-9758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mutL (PRK00095), RVT-GII, GIIM (pfam08388), Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SRKC01000036.1 (81917 bp)
Overview 1 RT 1: 79617-81574 bp Neighborhood of RT #1 [79617, 81798] RVT_N RVT-GII YkfC Feature: gene Location: 79617-79817 bp Feature: gene Location: 79978-80229 bp Feature: gene Location: 80251-81798 bp Feature: domain Description: RVT_N Location: 80302-80545 bp Feature: domain Description: RVT_N Location: 80302 -80545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80590-81241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80590-812 41 bp Feature: domain Description: YkfC Location: 81241-81574 bp Feature: domain Description: YkfC Location: 812 41-81574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: SRKC01000011.1 (10213 bp)
Overview 1 RT 1: 5863-10211 bp Neighborhood of RT #1 [5863, 10211] recomb_XerD PRK06620 RVT_N RVT-GII YkfC Feature: gene Location: 5863-6849 bp Feature: domain Description: recomb_XerD Location: 5914-6829 bp Feature: domain Description: recomb_XerD Location: 5914-6829 bp Feature: gene Location: 7221-7856 bp Feature: domain Description: PRK06620 Location: 7245-7839 bp Feature: domain Description: PRK06620 Location: 7245-783 9 bp Feature: gene Location: 8033-9580 bp Feature: domain Description: RVT_N Location: 8084-8327 bp Feature: domain Description: RVT_N Location: 8084-83 27 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8372-9023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 72-9023 bp Feature: domain Description: YkfC Location: 9023-9356 bp Feature: domain Description: YkfC Location: 9023 -93 56 bp Feature: gene Location: 9602-9853 bp Feature: gene Location: 10014-10211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recomb_XerD (TIGR02225), PRK06620 (hypothetical protein; Validated), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: SRKC01000022.1 (82271 bp)
Overview 1 RT 1: 76864-81689 bp Neighborhood of RT #1 [76864, 81736] ANK ANK ANK Ank_4 ANK ANK ANK ANK PHA02741 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 76864-79464 bp Feature: domain Description: ANK Location: 76930-77041 bp Feature: domain Description: ANK Location: 76930-7704 1 bp Feature: domain Description: ANK Location: 77050-77416 bp Feature: domain Description: ANK Location: 77050-774 16 bp Feature: domain Description: ANK Location: 77560-77938 bp Feature: domain Description: ANK Location: 77560-77938 bp Feature: domain Description: Ank_4 Location: 78019-78139 bp Feature: domain Description: Ank_4 Location: 78019-78139 bp Feature: domain Description: ANK Location: 78172-78472 bp Feature: domain Description: ANK Location: 78172-784 72 bp Feature: domain Description: ANK Location: 78478-78739 bp Feature: domain Description: ANK Location: 784 78-78739 bp Feature: domain Description: ANK Location: 78757-79012 bp Feature: domain Description: ANK Location: 78757-79012 bp Feature: domain Description: ANK Location: 79051-79216 bp Feature: domain Description: ANK Location: 79051-79216 bp Feature: domain Description: PHA02741 Location: 79231-79399 bp Feature: domain Description: PHA0274 1 Location: 79231-79399 bp Feature: gene Location: 79650-79886 bp Feature: gene Location: 79943-81736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80210-80999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80210-80999 bp Feature: domain Description: Intron_maturas2 Location: 81092-81353 bp Feature: domain Description: Intron_maturas2 Location: 81092-81353 bp Feature: domain Description: HNHc Note: nucleases Location: 81509-81689 bp Feature: domain Description: HNHc Note: nucleases Location: 81509-81689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANK (smart00248), Ank_4 (pfam13637), PHA02741 (hypothetical protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: SRKC01000015.1 (8094 bp)
Overview 1 RT 1: 5794-7751 bp Neighborhood of RT #1 [5794, 7975] RVT_N RVT-GII YkfC Feature: gene Location: 5794-5994 bp Feature: gene Location: 6155-6406 bp Feature: gene Location: 6428-7975 bp Feature: domain Description: RVT_N Location: 6479-6722 bp Feature: domain Description: RVT_N Location: 6479-6722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6767-7418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6767-7418 bp Feature: domain Description: YkfC Location: 7418-7751 bp Feature: domain Description: YkfC Location: 7418-775 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: SRKC01000030.1 (16605 bp)
Overview 1 RT 1: 12093-16577 bp Neighborhood of RT #1 [12093, 16603] RVT-GII Rve Feature: gene Location: 12093-14627 bp Feature: gene Location: 15258-15464 bp Feature: gene Location: 15871-16050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15874-16000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15874-16 000 bp Feature: gene Location: 16478-16603 bp Feature: domain Description: Rve Location: 16484-16577 bp Feature: domain Description: Rve Location: 16 484-16 577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Rve (COG3316)

Seq: SRKC01000028.1 (4629 bp)
Overview 1 RT 1: 569-4627 bp Neighborhood of RT #1 [569, 4627] FeS_assembly_P ParA ANK RVT_N RVT-GII YkfC Feature: gene Location: 569-1588 bp Feature: domain Description: FeS_assembly_P Location: 611-794 bp Feature: domain Description: FeS_assembly_P Location: 611-7 94 bp Feature: domain Description: ParA Location: 854-1562 bp Feature: domain Description: ParA Location: 854-1562 bp Feature: gene Location: 1668-2330 bp Feature: domain Description: ANK Location: 1848-2322 bp Feature: domain Description: ANK Location: 1848-2322 bp Feature: gene Location: 2449-3996 bp Feature: domain Description: RVT_N Location: 2500-2743 bp Feature: domain Description: RVT_N Location: 2500-27 43 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2788-3439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 88-3439 bp Feature: domain Description: YkfC Location: 3439-3772 bp Feature: domain Description: YkfC Location: 3439-37 7 2 bp Feature: gene Location: 4018-4269 bp Feature: gene Location: 4430-4627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FeS_assembly_P (pfam01883), ParA (pfam10609), ANK (smart00248), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: SRKC01000027.1 (70814 bp)
Overview 1 RT 1: 3-3977 bp Neighborhood of RT #1 [3, 3988] RVT_N RVT-GII YkfC dcd Feature: gene Location: 3-200 bp Feature: gene Location: 361-612 bp Feature: gene Location: 634-2181 bp Feature: domain Description: RVT_N Location: 685-928 bp Feature: domain Description: RVT_N Location: 68 5-928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973-1624 bp Feature: domain Description: YkfC Location: 1624-1957 bp Feature: domain Description: YkfC Location: 1624-1957 bp Feature: gene Location: 2412-3425 bp Feature: gene Location: 3431-3988 bp Feature: domain Description: dcd Location: 3440-3977 bp Feature: domain Description: dcd Location: 3440-3977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), dcd (PRK00416)

Seq: SRKC01000014.1 (53379 bp)
Overview 1 RT 1: 51079-53036 bp Neighborhood of RT #1 [51079, 53260] RVT_N RVT-GII YkfC Feature: gene Location: 51079-51279 bp Feature: gene Location: 51440-51691 bp Feature: gene Location: 51713-53260 bp Feature: domain Description: RVT_N Location: 51764-52007 bp Feature: domain Description: RVT_N Location: 51764-52007 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52052-52703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52052-52703 bp Feature: domain Description: YkfC Location: 52703-53036 bp Feature: domain Description: YkfC Location: 52703-53036 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: SRKC01000025.1 (69038 bp)
Overview 1 RT 1: 120-2301 bp Neighborhood of RT #1 [120, 2301] RVT_N RVT-GII YkfC Feature: gene Location: 120-1667 bp Feature: domain Description: RVT_N Location: 171-414 bp Feature: domain Description: RVT_N Location: 171-414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459-1110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 459-1110 bp Feature: domain Description: YkfC Location: 1110-1443 bp Feature: domain Description: YkfC Location: 1110 -1443 bp Feature: gene Location: 1689-1940 bp Feature: gene Location: 2101-2301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344)

Seq: SRKC01000026.1 (36470 bp)
Overview 1 RT 1: 3-5009 bp Neighborhood of RT #1 [3, 5009] RVT_N RVT-GII YkfC ANK ANK ANK Feature: gene Location: 3-200 bp Feature: gene Location: 361-612 bp Feature: gene Location: 634-2181 bp Feature: domain Description: RVT_N Location: 685-928 bp Feature: domain Description: RVT_N Location: 685-928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973-1624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973-1624 bp Feature: domain Description: YkfC Location: 1624-1957 bp Feature: domain Description: YkfC Location: 1624-1957 bp Feature: gene Location: 2292-3749 bp Feature: domain Description: ANK Location: 3117-3315 bp Feature: domain Description: ANK Location: 311 7-3315 bp Feature: domain Description: ANK Location: 3339-3420 bp Feature: domain Description: ANK Location: 3339-3420 bp Feature: domain Description: ANK Location: 3435-3741 bp Feature: domain Description: ANK Location: 3435-3741 bp Feature: gene Location: 3900-5009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), ANK (smart00248)

Seq: SRKC01000007.1 (7443 bp)
Overview 1 RT 1: 4138-7441 bp Neighborhood of RT #1 [4138, 7441] Phage_TAC_7 T_den_put_tspse RVT_N RVT-GII YkfC Feature: gene Location: 4138-4392 bp Feature: domain Description: Phage_TAC_7 Location: 4150-4369 bp Feature: domain Description: Phage_TAC_7 Location: 4150-4369 bp Feature: gene Location: 4526-5266 bp Feature: domain Description: T_den_put_tspse Location: 4652-5246 bp Feature: domain Description: T_den_put_tspse Location: 4652-5246 bp Feature: gene Location: 5263-6810 bp Feature: domain Description: RVT_N Location: 5314-5557 bp Feature: domain Description: RVT_N Location: 5314-5557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5602-6253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5602-6253 bp Feature: domain Description: YkfC Location: 6253-6586 bp Feature: domain Description: YkfC Location: 6253-6586 bp Feature: gene Location: 6832-7083 bp Feature: gene Location: 7244-7441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_TAC_7 (pfam10109), T_den_put_tspse (TIGR01784), RVT_N (pfam13655), RVT-GII, YkfC (COG3344)