myRT

myRT report for GCA_004745185.1_ASM474518v1

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Seq: PDIG01000018.1 (70013 bp)
Overview 1 RT 1: 22960-27273 bp Neighborhood of RT #1 [22960, 28172] Q RVT-AbiP2 Phage_GPA Feature: gene Location: 22960-23994 bp Feature: domain Description: Q Location: 22963-23986 bp Feature: domain Description: Q Location: 22963-23986 bp Feature: gene Location: 24033-24347 bp Feature: gene Location: 24373-25239 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 24790-25234 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 24790-25234 bp Feature: gene Location: 25418-25921 bp Feature: gene Location: 26025-28172 bp Feature: domain Description: Phage_GPA Location: 26286-27273 bp Feature: domain Description: Phage_GPA Location: 26286-27273 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840)

Seq: PDIG01000014.1 (207571 bp)
Overview 1 RT 1: 115954-121252 bp Neighborhood of RT #1 [115954, 121269] DUF4156 DUF2188 RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 115954-116307 bp Feature: domain Description: DUF4156 Location: 116023-116299 bp Feature: domain Description: DUF4156 Location: 11602 3-1162 99 bp Feature: gene Location: 116565-116786 bp Feature: domain Description: DUF2188 Location: 116580-116757 bp Feature: domain Description: DUF2 188 Location: 116580-116757 bp Feature: gene Location: 116855-118525 bp Feature: domain Description: RVT_N Location: 116918-117152 bp Feature: domain Description: RVT_N Location: 116918-117152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117206-117851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1172 06-117851 bp Feature: domain Description: GIIM Note: maturase Location: 117905-118136 bp Feature: domain Description: GIIM Note: maturase Location: 117905-118136 bp Feature: domain Description: HNHc Note: nucleases Location: 118346-118508 bp Feature: domain Description: HNHc Note: nucleases Location: 118346-118508 bp Feature: gene Location: 118956-119282 bp Feature: gene Location: 119623-121269 bp Feature: domain Description: groEL Location: 119629-121252 bp Feature: domain Description: groEL Location: 11962 9-12 12 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4156 (pfam13698), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), groEL (PRK12852)

Seq: PDIG01000017.1 (189763 bp)
Overview 1 RT 1: 143538-146653 bp Neighborhood of RT #1 [143538, 146658] dut slmA RVT-Retrons pyrE Feature: gene Location: 143538-143996 bp Feature: domain Description: dut Location: 143544-143991 bp Feature: domain Description: dut Location: 143 544-143 991 bp Feature: gene Location: 144103-144699 bp Feature: domain Description: slmA Location: 144109-144685 bp Feature: domain Description: slmA Location: 144109-144685 bp Feature: gene Location: 144745-145704 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 144880-145429 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 144880-145429 bp Feature: gene Location: 145591-145869 bp Feature: gene Location: 146002-146658 bp Feature: domain Description: pyrE Location: 146020-146653 bp Feature: domain Description: pyrE Location: 146020-146653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336)