myRT

myRT report for GCA_004767175.1_ASM476717v1

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Seq: RRZS01000006.1 (3736309 bp)
Overview 1 RT 1: 462670-466208 bp 2 RT 2: 475860-479280 bp 3 RT 3: 2541757-2547035 bp 4 RT 4: 3150814-3154462 bp Neighborhood of RT #1 [462670, 466339] DcuC RVT-GII Asparaginase_2 Neighborhood of RT #2 [475860, 479280] FadR PHA02517 RVT-GII GIIM Neighborhood of RT #3 [2541757, 2547151] RVT-UG7 PRK09692 Phage_int_SAM_5 INT_C_like_1 Neighborhood of RT #4 [3150814, 3154527] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 462670-464031 bp Feature: domain Description: DcuC Location: 462673-464005 bp Feature: domain Description: DcuC Location: 462673-464005 bp Feature: gene Location: 464084-464455 bp Feature: gene Location: 464677-465123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464983-465085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464983-465085 bp Feature: gene Location: 465171-465320 bp Feature: gene Location: 465647-466339 bp Feature: domain Description: Asparaginase_2 Location: 465737-466208 bp Feature: domain Description: Asparaginase_2 Location: 465737-466208 bp Feature: gene Location: 475860-475994 bp Feature: domain Description: FadR Location: 475875-475977 bp Feature: domain Description: FadR Location: 475875-475977 bp Feature: gene Location: 476213-476653 bp Feature: domain Description: PHA02517 Location: 476216-476624 bp Feature: domain Description: PHA0251 7 Location: 47621 6-476624 bp Feature: gene Location: 476782-478305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477055-477787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477055-477787 bp Feature: domain Description: GIIM Note: maturase Location: 477862-478060 bp Feature: domain Description: GIIM Note: maturase Location: 477862-478060 bp Feature: gene Location: 478599-478970 bp Feature: gene Location: 479041-479280 bp Feature: gene Location: 2541757-2541990 bp Feature: gene Location: 2542006-2542746 bp Feature: gene Location: 2542743-2544371 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2543151-2543580 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 25431 51 -2543580 bp Feature: gene Location: 2544364-2545548 bp Feature: domain Description: PRK09692 Location: 2544370-2545525 bp Feature: domain Description: PRK09692 Location: 2544370-2545525 bp Feature: gene Location: 2545874-2547151 bp Feature: domain Description: Phage_int_SAM_5 Location: 2546186-2546423 bp Feature: domain Description: Phage_int_SAM_5 Location: 25461 86-2546423 bp Feature: domain Description: INT_C_like_1 Location: 2546519-2547035 bp Feature: domain Description: INT_C_like_1 Location: 254651 9-2547035 bp Feature: gene Location: 3150814-3150957 bp Feature: gene Location: 3151370-3151756 bp Feature: domain Description: PHA02517 Location: 3151373-3151754 bp Feature: domain Description: PHA0251 7 Location: 31 51 373-31 51 754 bp Feature: gene Location: 3151933-3153456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3152206-3152938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 52206-31 52938 bp Feature: domain Description: GIIM Note: maturase Location: 3153013-3153211 bp Feature: domain Description: GIIM Note: maturase Location: 31 5301 3-31 5321 1 bp Feature: gene Location: 3153410-3153835 bp Feature: gene Location: 3154048-3154527 bp Feature: domain Description: PHA02517 Location: 3154108-3154462 bp Feature: domain Description: PHA0251 7 Location: 31 541 08-31 54462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DcuC (TIGR00771), RVT-GII, Asparaginase_2 (pfam01112), FadR (COG2186), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), RVT-UG7, PRK09692 (Integrase; provisional), Phage_int_SAM_5 (pfam13102), INT_C_like_1 (cd01184)