myRT

myRT report for GCA_004770235.1_ASM477023v1

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Seq: RQGS01000047.1 (21017 bp)
Overview 1 RT 1: 11517-15497 bp Neighborhood of RT #1 [11517, 15580] RVT-UG13 HTH_XRE HTH_XRE HTH_XRE Feature: gene Location: 11517-12641 bp Feature: gene Location: 12653-12784 bp Feature: gene Location: 12850-14550 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 13159-13627 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 31 59-1 3627 bp Feature: gene Location: 14932-15150 bp Feature: domain Description: HTH_XRE Location: 14965-15010 bp Feature: domain Description: HTH_XRE Location: 1 4965-1 501 0 bp Feature: domain Description: HTH_XRE Location: 15037-15139 bp Feature: domain Description: HTH_XRE Location: 1 5037-1 51 39 bp Feature: gene Location: 15245-15580 bp Feature: domain Description: HTH_XRE Location: 15341-15497 bp Feature: domain Description: HTH_XRE Location: 1 5341 -1 5497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13, HTH_XRE (smart00530)

Seq: RQGS01000040.1 (6161 bp)
Overview 1 RT 1: 133-5939 bp Neighborhood of RT #1 [133, 5939] DUF1725 L1-EN RVT-UNC Tnp_22_trimer Transposase_22 Tnp_22_dsRBD Feature: gene Location: 133-1299 bp Feature: domain Description: DUF1725 Location: 1198-1252 bp Feature: domain Description: DUF172 5 Location: 1198-12 52 bp Feature: gene Location: 1272-3881 bp Feature: domain Description: L1-EN Location: 1278-1905 bp Feature: domain Description: L1-EN Location: 12 78-1905 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2775-3435 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2 775-3435 bp Feature: gene Location: 4023-5039 bp Feature: domain Description: Tnp_22_trimer Location: 4353-4479 bp Feature: domain Description: Tnp_2 2 _trimer Location: 4353-4479 bp Feature: domain Description: Transposase_22 Location: 4488-4779 bp Feature: domain Description: Transposase_2 2 Location: 4488-4779 bp Feature: domain Description: Tnp_22_dsRBD Location: 4788-4980 bp Feature: domain Description: Tnp_2 2 _dsRBD Location: 4788-4980 bp Feature: gene Location: 5532-5939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1725 (pfam08333), L1-EN (cd09076), RVT-UG11/RVT-GII/RVT-CRISPR(RVT-UNC), Tnp_22_trimer (pfam17489), Transposase_22 (pfam02994), Tnp_22_dsRBD (pfam17490)