myRT

myRT report for GCA_004792275.1_ASM479227v1

Download annotations/find similar RTs

Seq: SRSR01000043.1 (4265 bp)
Overview 1 RT 1: 1-3656 bp Neighborhood of RT #1 [1, 3661] RVT-GII DUF5372 PinE Zn_ribbon_recom RVT-GII Feature: gene Location: 1-576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19-574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9-574 bp Feature: gene Location: 594-869 bp Feature: domain Description: DUF5372 Location: 612-831 bp Feature: domain Description: DUF5372 Location: 61 2-831 bp Feature: gene Location: 924-1259 bp Feature: gene Location: 1378-3432 bp Feature: domain Description: PinE Location: 1423-2098 bp Feature: domain Description: PinE Location: 1 423-2098 bp Feature: domain Description: Zn_ribbon_recom Location: 2368-2545 bp Feature: domain Description: Zn_ribbon_recom Location: 2368-2545 bp Feature: gene Location: 3443-3661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3608-3656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3608-3656 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF5372 (pfam17342), PinE (COG1961), Zn_ribbon_recom (pfam13408)

Seq: SRSR01000031.1 (23324 bp)
Overview 1 RT 1: 12630-15441 bp Neighborhood of RT #1 [12630, 15809] kpsF RVT-GII Zn_Tnp_IS1595 Feature: gene Location: 12630-13592 bp Feature: domain Description: kpsF Location: 12753-13563 bp Feature: domain Description: kpsF Location: 12 753-13563 bp Feature: gene Location: 14047-14358 bp Feature: gene Location: 14441-14776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14450-14660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14450-14660 bp Feature: gene Location: 14897-15067 bp Feature: gene Location: 15204-15809 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 15276-15441 bp Feature: domain Description: Zn_Tnp_IS1595 Location: 152 76-15441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT kpsF (TIGR00393), RVT-GII, Zn_Tnp_IS1595 (pfam12760)

Seq: SRSR01000035.1 (14963 bp)
Overview 1 RT 1: 11935-14876 bp Neighborhood of RT #1 [11935, 14962] DDE_3 RVT-GII GIIM Feature: gene Location: 11935-13725 bp Feature: gene Location: 13815-14288 bp Feature: domain Description: DDE_3 Location: 13830-14196 bp Feature: domain Description: DDE_3 Location: 13 83 0-14196 bp Feature: gene Location: 14384-14962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14387-14573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 87-14573 bp Feature: domain Description: GIIM Note: maturase Location: 14654-14876 bp Feature: domain Description: GIIM Note: maturase Location: 14654-14876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, GIIM (pfam08388)