myRT

myRT report for GCA_004793655.1_ASM479365v1

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Seq: SRYD01000097.1 (4879 bp)
Overview 1 RT 1: 2-4601 bp Neighborhood of RT #1 [2, 4601] RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 2-502 bp Feature: gene Location: 1046-2863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1313-2135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 3-21 35 bp Feature: domain Description: Intron_maturas2 Location: 2276-2513 bp Feature: domain Description: Intron_maturas2 Location: 2276-251 3 bp Feature: domain Description: HNHc Note: nucleases Location: 2684-2834 bp Feature: domain Description: HNHc Note: nucleases Location: 2684-2834 bp Feature: gene Location: 2827-3801 bp Feature: domain Description: TraG-D_C Location: 3205-3535 bp Feature: domain Description: TraG-D_C Location: 3205-3535 bp Feature: gene Location: 3849-4601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), TraG-D_C (pfam12696)

Seq: SRYD01000101.1 (2506 bp)
Overview 1 RT 1: 122-2468 bp Neighborhood of RT #1 [122, 2468] RVT_N RVT-GII GIIM Feature: gene Location: 122-1831 bp Feature: domain Description: RVT_N Location: 185-428 bp Feature: domain Description: RVT_N Location: 185-42 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 473-1142 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1433 bp Feature: domain Description: GIIM Note: maturase Location: 1199-1433 bp Feature: gene Location: 2310-2468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: SRYD01000047.1 (30065 bp)
Overview 1 RT 1: 4419-15824 bp Neighborhood of RT #1 [4419, 17644] RVT-DGRs Prophage_tail Prophage_tail Feature: gene Location: 4419-11990 bp Feature: gene Location: 12057-12335 bp Feature: gene Location: 12393-13784 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12645-13248 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12645-13 248 bp Feature: gene Location: 13791-14294 bp Feature: gene Location: 14291-17644 bp Feature: domain Description: Prophage_tail Location: 14714-14960 bp Feature: domain Description: Prophage_tail Location: 14714-14960 bp Feature: domain Description: Prophage_tail Location: 15668-15824 bp Feature: domain Description: Prophage_tail Location: 15668-15824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Prophage_tail (pfam06605)

Seq: SRYD01000054.1 (25401 bp)
Overview 1 RT 1: 2-4536 bp Neighborhood of RT #1 [2, 4586] RVT_N RVT-GII GIIM TraG-D_C RteC Feature: gene Location: 2-265 bp Feature: gene Location: 490-633 bp Feature: gene Location: 910-2562 bp Feature: domain Description: RVT_N Location: 964-1207 bp Feature: domain Description: RVT_N Location: 964 -1207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252-1900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1252-1900 bp Feature: domain Description: GIIM Note: maturase Location: 1954-2185 bp Feature: domain Description: GIIM Note: maturase Location: 1954 -2185 bp Feature: gene Location: 2567-3781 bp Feature: domain Description: TraG-D_C Location: 3149-3479 bp Feature: domain Description: TraG-D_C Location: 314 9-34 79 bp Feature: gene Location: 3927-4586 bp Feature: domain Description: RteC Location: 4206-4536 bp Feature: domain Description: RteC Location: 4 206-4 536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), RteC (pfam09357)

Seq: SRYD01000052.1 (26320 bp)
Overview 1 RT 1: 2734-8595 bp Neighborhood of RT #1 [2734, 8624] RVT-UG24 dnaG Feature: gene Location: 2734-2949 bp Feature: gene Location: 3020-3166 bp Feature: gene Location: 3418-6858 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 3931-4393 bp Feature: RT Description: RVT-UG24 Note: UG24 RT Location: 3931-4393 bp Feature: gene Location: 6848-7582 bp Feature: gene Location: 7587-8624 bp Feature: domain Description: dnaG Location: 7680-8595 bp Feature: domain Description: dnaG Location: 7680-85 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG24, dnaG (TIGR01391)

Seq: SRYD01000025.1 (49822 bp)
Overview 1 RT 1: 27143-31979 bp Neighborhood of RT #1 [27143, 32017] RVT-DGRs MurNAc-LAA Feature: gene Location: 27143-28783 bp Feature: gene Location: 28960-29283 bp Feature: gene Location: 29619-30917 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29829-30456 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29829-30456 bp Feature: gene Location: 30922-31410 bp Feature: gene Location: 31394-32017 bp Feature: domain Description: MurNAc-LAA Location: 31403-31979 bp Feature: domain Description: MurNAc-LAA Location: 31403-31979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, MurNAc-LAA (cl02713)

Seq: SRYD01000103.1 (2419 bp)
Overview 1 RT 1: 95-2257 bp Neighborhood of RT #1 [95, 2257] RVT_N RVT-GII GIIM Feature: gene Location: 95-1798 bp Feature: domain Description: RVT_N Location: 167-404 bp Feature: domain Description: RVT_N Location: 167 -404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1109 bp Feature: domain Description: GIIM Note: maturase Location: 1160-1394 bp Feature: domain Description: GIIM Note: maturase Location: 1160-1394 bp Feature: gene Location: 1861-1992 bp Feature: gene Location: 2030-2257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)