myRT

myRT report for GCA_004793975.1_ASM479397v1

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Seq: SRYB01000009.1 (141091 bp)
Overview 1 RT 1: 82558-86403 bp Neighborhood of RT #1 [82558, 86417] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 82558-82836 bp Feature: gene Location: 82872-83282 bp Feature: gene Location: 83324-84643 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83501-84206 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83501 -84206 bp Feature: gene Location: 84936-85319 bp Feature: domain Description: Avd_like Location: 84963-85272 bp Feature: domain Description: Avd_like Location: 84963-85272 bp Feature: gene Location: 85584-86417 bp Feature: domain Description: DUF1566 Location: 85932-86403 bp Feature: domain Description: DUF1 566 Location: 85932-86403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: SRYB01000004.1 (213612 bp)
Overview 1 RT 1: 63360-66985 bp Neighborhood of RT #1 [63360, 66985] RVT-DGRs Feature: gene Location: 63360-63746 bp Feature: gene Location: 63743-64174 bp Feature: gene Location: 64134-65273 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64440-65040 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64440-65040 bp Feature: gene Location: 65337-65525 bp Feature: gene Location: 65615-66985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: SRYB01000001.1 (301915 bp)
Overview 1 RT 1: 92209-96118 bp 2 RT 2: 258091-262191 bp Neighborhood of RT #1 [92209, 96118] RVT-DGRs Neighborhood of RT #2 [258091, 262196] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_N TraO Feature: gene Location: 92209-92613 bp Feature: gene Location: 92634-92960 bp Feature: gene Location: 93390-94208 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93768-94092 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93 768-94092 bp Feature: gene Location: 94309-94692 bp Feature: gene Location: 94772-96118 bp Feature: gene Location: 258091-258387 bp Feature: gene Location: 258468-258902 bp Feature: gene Location: 258932-260740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259196-260018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259196-260018 bp Feature: domain Description: Intron_maturas2 Location: 260162-260399 bp Feature: domain Description: Intron_maturas2 Location: 260162-2603 99 bp Feature: domain Description: HNHc Note: nucleases Location: 260558-260714 bp Feature: domain Description: HNHc Note: nucleases Location: 260558-260714 bp Feature: gene Location: 260730-261611 bp Feature: domain Description: Bac_Flav_CT_N Location: 260853-261591 bp Feature: domain Description: Bac_Flav_CT_N Location: 260853 -261591 bp Feature: gene Location: 261615-262196 bp Feature: domain Description: TraO Location: 261690-262191 bp Feature: domain Description: TraO Location: 261690-262191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_N (TIGR03780), TraO (pfam10626)

Seq: SRYB01000002.1 (263803 bp)
Overview 1 RT 1: 189100-196286 bp Neighborhood of RT #1 [189100, 197596] TonB_C WG_beta_rep RVT-AbiP2 DUF1848 RecQ Feature: gene Location: 189100-189876 bp Feature: domain Description: TonB_C Location: 189343-189574 bp Feature: domain Description: TonB_C Location: 18934 3-189574 bp Feature: domain Description: WG_beta_rep Location: 189685-189769 bp Feature: domain Description: WG_beta_rep Location: 189685-189769 bp Feature: gene Location: 189915-190085 bp Feature: gene Location: 190358-192319 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 190787-191246 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 190787-19124 6 bp Feature: gene Location: 192388-193464 bp Feature: domain Description: DUF1848 Location: 192463-193384 bp Feature: domain Description: DUF184 8 Location: 1924 63-193384 bp Feature: gene Location: 193466-197596 bp Feature: domain Description: RecQ Location: 195020-196286 bp Feature: domain Description: RecQ Location: 195020-196286 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), WG_beta_rep (pfam14903), RVT-AbiP2, DUF1848 (pfam08902), RecQ (COG0514)

Seq: SRYB01000003.1 (215813 bp)
Overview 1 RT 1: 94870-99065 bp Neighborhood of RT #1 [94870, 99065] RVT-DGRs Feature: gene Location: 94870-96306 bp Feature: gene Location: 96483-96773 bp Feature: gene Location: 96864-98405 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97074-97815 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97074-97815 bp Feature: gene Location: 98446-98835 bp Feature: gene Location: 98847-99065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs