myRT

myRT report for GCA_004794115.1_ASM479411v1

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Seq: SRYI01000004.1 (105254 bp)
Overview 1 RT 1: 3-3465 bp Neighborhood of RT #1 [3, 3482] RVT-GII GIIM Uup ABC_tran_CTD Rex Feature: gene Location: 3-575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9-1 29 bp Feature: domain Description: GIIM Note: maturase Location: 183-411 bp Feature: domain Description: GIIM Note: maturase Location: 1 83-41 1 bp Feature: gene Location: 660-2597 bp Feature: domain Description: Uup Location: 666-2265 bp Feature: domain Description: Uup Location: 666-2265 bp Feature: domain Description: ABC_tran_CTD Location: 2373-2559 bp Feature: domain Description: ABC_tran_CTD Location: 2373-2559 bp Feature: gene Location: 2838-3482 bp Feature: domain Description: Rex Location: 2847-3465 bp Feature: domain Description: Rex Location: 2847-3465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Uup (COG0488), ABC_tran_CTD (pfam16326), Rex (COG2344)

Seq: SRYI01000092.1 (305 bp)
Overview 1 RT 1: 3-303 bp Neighborhood of RT #1 [3, 302] RVT-GII Feature: gene Location: 3-302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15-303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SRYI01000087.1 (443 bp)
Overview 1 RT 1: 3-441 bp Neighborhood of RT #1 [3, 440] RVT-GII Feature: gene Location: 3-440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SRYI01000003.1 (117442 bp)
Overview 1 RT 1: 27078-31782 bp Neighborhood of RT #1 [27078, 32288] guaA group_II_RT_mat RVT-GII COG2865 TIR_2 Feature: gene Location: 27078-28694 bp Feature: domain Description: guaA Location: 27171-28692 bp Feature: domain Description: guaA Location: 27171-28692 bp Feature: gene Location: 29090-29314 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 29102-29306 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 29102-29306 bp Feature: gene Location: 29321-29605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29327-29549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29327-2954 9 bp Feature: gene Location: 29871-31397 bp Feature: domain Description: COG2865 Location: 29880-31353 bp Feature: domain Description: COG2865 Location: 29880-31353 bp Feature: gene Location: 31410-32288 bp Feature: domain Description: TIR_2 Location: 31437-31782 bp Feature: domain Description: TIR_2 Location: 314 37-31782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), group_II_RT_mat (TIGR04416), RVT-GII, COG2865 (Predicted transcriptional regulator, contains HTH domain ), TIR_2 (pfam13676)