myRT

myRT report for GCA_004799195.1_ASM479919v1

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Seq: SSML01000009.1 (65863 bp)
Overview 1 RT 1: 47998-52222 bp 2 RT 2: 55112-58427 bp Neighborhood of RT #1 [47998, 52222] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [55112, 58552] RVT_N RVT-GII GIIM HNHc DUF1380 Feature: gene Location: 47998-48231 bp Feature: domain Description: DUF905 Location: 48028-48226 bp Feature: domain Description: DUF905 Location: 48028-48226 bp Feature: gene Location: 48289-48729 bp Feature: domain Description: PRK13732 Location: 48295-48727 bp Feature: domain Description: PRK1 3732 Location: 48295-48727 bp Feature: gene Location: 48924-50825 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49191-50022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 491 91 -50022 bp Feature: domain Description: Intron_maturas2 Location: 50136-50394 bp Feature: domain Description: Intron_maturas2 Location: 501 36-50394 bp Feature: domain Description: HNHc Note: nucleases Location: 50568-50730 bp Feature: domain Description: HNHc Note: nucleases Location: 50568-50730 bp Feature: gene Location: 51542-51778 bp Feature: gene Location: 51779-52222 bp Feature: gene Location: 55112-55387 bp Feature: gene Location: 55499-55681 bp Feature: gene Location: 55961-57628 bp Feature: domain Description: RVT_N Location: 56009-56246 bp Feature: domain Description: RVT_N Location: 56009-56246 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56297-56939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56297-56939 bp Feature: domain Description: GIIM Note: maturase Location: 56990-57224 bp Feature: domain Description: GIIM Note: maturase Location: 56990-57224 bp Feature: domain Description: HNHc Note: nucleases Location: 57434-57593 bp Feature: domain Description: HNHc Note: nucleases Location: 57434-57593 bp Feature: gene Location: 57942-58133 bp Feature: gene Location: 58130-58552 bp Feature: domain Description: DUF1380 Location: 58133-58427 bp Feature: domain Description: DUF1 380 Location: 581 33-58427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SSML01000175.1 (5828 bp)
Overview 1 RT 1: 3-2592 bp Neighborhood of RT #1 [3, 2606] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 3-137 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15-111 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15-111 bp Feature: gene Location: 615-1832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 801-1455 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1755 bp Feature: domain Description: GIIM Note: maturase Location: 1533-1755 bp Feature: gene Location: 1948-2094 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1960-2071 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1960-2 071 bp Feature: gene Location: 2121-2606 bp Feature: domain Description: COG3547 Location: 2139-2592 bp Feature: domain Description: COG3547 Location: 2 139-2 592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: SSML01000222.1 (2620 bp)
Overview 1 RT 1: 39-2255 bp Neighborhood of RT #1 [39, 2275] RVT-GII Tra5 PAP2_acid_phosphatase Feature: gene Location: 39-917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 339-831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 9-83 1 bp Feature: gene Location: 930-1130 bp Feature: domain Description: Tra5 Location: 939-1113 bp Feature: domain Description: Tra5 Location: 93 9-1113 bp Feature: gene Location: 1526-2275 bp Feature: domain Description: PAP2_acid_phosphatase Location: 1601-2255 bp Feature: domain Description: PAP2_acid_phosphatase Location: 1601-2255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT