myRT

myRT report for GCA_004801515.1_ASM480151v1

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Seq: CP039312.1 (145588 bp)
Overview 1 RT 1: 29290-34711 bp 2 RT 2: 139705-143894 bp Neighborhood of RT #1 [29290, 34719] DEDD_Tnp_IS110 Transposase_20 RVT-GII GIIM Rve AAA_22 Tn7_TnsC_Int Neighborhood of RT #2 [139705, 143894] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 29290-30528 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 29323-29785 bp Feature: domain Description: DEDD_Tnp_IS1 1 0 Location: 29323-29785 bp Feature: domain Description: Transposase_20 Location: 30115-30367 bp Feature: domain Description: Transposase_20 Location: 301 1 5-30367 bp Feature: gene Location: 30886-31050 bp Feature: gene Location: 31172-32461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31454-32072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 454-32072 bp Feature: domain Description: GIIM Note: maturase Location: 32120-32324 bp Feature: domain Description: GIIM Note: maturase Location: 321 20-32324 bp Feature: gene Location: 32583-33299 bp Feature: domain Description: Rve Location: 32598-33243 bp Feature: domain Description: Rve Location: 32598-33243 bp Feature: gene Location: 33346-34719 bp Feature: domain Description: AAA_22 Location: 33451-33895 bp Feature: domain Description: AAA_22 Location: 33451 -33895 bp Feature: domain Description: Tn7_TnsC_Int Location: 34579-34711 bp Feature: domain Description: Tn7_TnsC_Int Location: 34579-3471 1 bp Feature: gene Location: 139705-140376 bp Feature: domain Description: Plasmid_stab_B Location: 139720-139927 bp Feature: domain Description: Plasmid_stab_B Location: 1 39720-1 39927 bp Feature: domain Description: Plasmid_stab_B Location: 140032-140239 bp Feature: domain Description: Plasmid_stab_B Location: 1 40032-1 40239 bp Feature: gene Location: 140379-141350 bp Feature: domain Description: StbA Location: 140382-141327 bp Feature: domain Description: StbA Location: 1 40382-1 41 327 bp Feature: gene Location: 141599-143086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142004-142694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 42004-1 42694 bp Feature: gene Location: 143092-143259 bp Feature: gene Location: 143499-143894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: CP039311.1 (5191789 bp)
Overview 1 RT 1: 479332-484668 bp 2 RT 2: 4075674-4079699 bp 3 RT 3: 4644242-4647007 bp Neighborhood of RT #1 [479332, 484679] Tra5 HTH_Tnp_1 RVT-Retrons COG3950 CdiI_2 Neighborhood of RT #2 [4075674, 4079699] RVT-GII Neighborhood of RT #3 [4644242, 4647072] group_II_RT_mat RVT-GII PHA02517 Feature: gene Location: 479332-480162 bp Feature: domain Description: Tra5 Location: 479356-480118 bp Feature: domain Description: Tra5 Location: 479356-480118 bp Feature: gene Location: 480189-480452 bp Feature: domain Description: HTH_Tnp_1 Location: 480195-480399 bp Feature: domain Description: HTH_Tnp_1 Location: 480195-480399 bp Feature: gene Location: 480678-481694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 480855-481452 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 480855-481452 bp Feature: gene Location: 481694-483337 bp Feature: domain Description: COG3950 Location: 481901-483284 bp Feature: domain Description: COG3950 Location: 481901-4832 84 bp Feature: gene Location: 484386-484679 bp Feature: domain Description: CdiI_2 Location: 484395-484668 bp Feature: domain Description: CdiI_2 Location: 484395-484668 bp Feature: gene Location: 4075674-4075805 bp Feature: gene Location: 4075858-4076001 bp Feature: gene Location: 4076243-4077730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4076648-4077338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4076648-4077338 bp Feature: gene Location: 4077781-4078014 bp Feature: gene Location: 4078161-4079699 bp Feature: gene Location: 4644242-4644421 bp Feature: gene Location: 4644534-4645106 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4644540-4644852 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4644540-4644852 bp Feature: gene Location: 4645099-4646055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4645372-4646008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4645372 -4646008 bp Feature: gene Location: 4646009-4646434 bp Feature: gene Location: 4646647-4647072 bp Feature: domain Description: PHA02517 Location: 4646668-4647007 bp Feature: domain Description: PHA02 517 Location: 4646668-4647007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT