myRT

myRT report for GCA_004801755.1_ASM480175v1

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Seq: SSTL01000006.1 (199331 bp)
Overview 1 RT 1: 78388-82583 bp Neighborhood of RT #1 [78388, 82583] RVT-DGRs Feature: gene Location: 78388-79824 bp Feature: gene Location: 80001-80291 bp Feature: gene Location: 80382-81923 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 80592-81333 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 80592-81 333 bp Feature: gene Location: 81964-82353 bp Feature: gene Location: 82365-82583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: SSTL01000001.1 (300327 bp)
Overview 1 RT 1: 92209-96118 bp 2 RT 2: 258091-262191 bp Neighborhood of RT #1 [92209, 96118] RVT-DGRs Neighborhood of RT #2 [258091, 262196] RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_N TraO Feature: gene Location: 92209-92613 bp Feature: gene Location: 92634-92960 bp Feature: gene Location: 93390-94208 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93768-94092 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 93768-94092 bp Feature: gene Location: 94309-94692 bp Feature: gene Location: 94772-96118 bp Feature: gene Location: 258091-258387 bp Feature: gene Location: 258468-258902 bp Feature: gene Location: 258932-260740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259196-260018 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 59196-2 60018 bp Feature: domain Description: Intron_maturas2 Location: 260162-260399 bp Feature: domain Description: Intron_maturas2 Location: 2 60162 -2 60399 bp Feature: domain Description: HNHc Note: nucleases Location: 260558-260714 bp Feature: domain Description: HNHc Note: nucleases Location: 2 60558-2 60714 bp Feature: gene Location: 260730-261611 bp Feature: domain Description: Bac_Flav_CT_N Location: 260853-261591 bp Feature: domain Description: Bac_Flav_CT_N Location: 2 60853-2 61591 bp Feature: gene Location: 261615-262196 bp Feature: domain Description: TraO Location: 261690-262191 bp Feature: domain Description: TraO Location: 2 61690-2 62 191 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_N (TIGR03780), TraO (pfam10626)

Seq: SSTL01000004.1 (213597 bp)
Overview 1 RT 1: 63360-66985 bp Neighborhood of RT #1 [63360, 66985] RVT-DGRs Feature: gene Location: 63360-63746 bp Feature: gene Location: 63743-64174 bp Feature: gene Location: 64134-65273 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64440-65040 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 64440-65040 bp Feature: gene Location: 65337-65525 bp Feature: gene Location: 65615-66985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: SSTL01000008.1 (141094 bp)
Overview 1 RT 1: 82558-86403 bp Neighborhood of RT #1 [82558, 86417] RVT-DGRs Avd_like DUF1566 Feature: gene Location: 82558-82836 bp Feature: gene Location: 82872-83282 bp Feature: gene Location: 83324-84643 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83501-84206 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 83501-84 206 bp Feature: gene Location: 84936-85319 bp Feature: domain Description: Avd_like Location: 84963-85272 bp Feature: domain Description: Avd_like Location: 84 963-85272 bp Feature: gene Location: 85584-86417 bp Feature: domain Description: DUF1566 Location: 85932-86403 bp Feature: domain Description: DUF1566 Location: 85932-864 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), DUF1566 (pfam07603)

Seq: SSTL01000003.1 (219894 bp)
Overview 1 RT 1: 145191-152377 bp Neighborhood of RT #1 [145191, 153687] TonB_C WG_beta_rep RVT-AbiP2 DUF1848 RecQ Feature: gene Location: 145191-145967 bp Feature: domain Description: TonB_C Location: 145434-145665 bp Feature: domain Description: TonB_C Location: 145 434-145 665 bp Feature: domain Description: WG_beta_rep Location: 145776-145860 bp Feature: domain Description: WG_beta_rep Location: 145 776-145 860 bp Feature: gene Location: 146006-146176 bp Feature: gene Location: 146449-148410 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 146878-147337 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 146878-147337 bp Feature: gene Location: 148479-149555 bp Feature: domain Description: DUF1848 Location: 148554-149475 bp Feature: domain Description: DUF1848 Location: 1485 5 4-149475 bp Feature: gene Location: 149557-153687 bp Feature: domain Description: RecQ Location: 151111-152377 bp Feature: domain Description: RecQ Location: 15 1111-15 2377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TonB_C (pfam03544), WG_beta_rep (pfam14903), RVT-AbiP2, DUF1848 (pfam08902), RecQ (COG0514)