myRT

myRT report for GCA_004803035.1_ASM480303v1

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Seq: SSUH01000055.1 (4042 bp)
Overview 1 RT 1: 1-2565 bp Neighborhood of RT #1 [1, 2565] CspC RVT-Retrons Feature: gene Location: 1-279 bp Feature: gene Location: 488-691 bp Feature: domain Description: CspC Location: 491-686 bp Feature: domain Description: CspC Location: 491 -686 bp Feature: gene Location: 696-1835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 840-1395 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 840-1 395 bp Feature: gene Location: 1857-2039 bp Feature: gene Location: 2419-2565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons

Seq: SSUH01000045.1 (17184 bp)
Overview 1 RT 1: 3751-8187 bp Neighborhood of RT #1 [3751, 8195] DDE_Tnp_IS1 InsA RVT-GII PRK10276 umuC Feature: gene Location: 3751-4128 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3754-4126 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3754-412 6 bp Feature: gene Location: 4173-4448 bp Feature: domain Description: InsA Location: 4176-4440 bp Feature: domain Description: InsA Location: 4176-4440 bp Feature: gene Location: 4600-6087 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5005-5695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5005-5695 bp Feature: gene Location: 6241-6924 bp Feature: domain Description: PRK10276 Location: 6544-6907 bp Feature: domain Description: PRK102 76 Location: 6544-6907 bp Feature: gene Location: 6924-8195 bp Feature: domain Description: umuC Location: 6927-8187 bp Feature: domain Description: umuC Location: 692 7-8187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), InsA (COG3677), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: SSUH01000001.1 (639322 bp)
Overview 1 RT 1: 314340-319641 bp Neighborhood of RT #1 [314340, 319646] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 314340-315305 bp Feature: domain Description: PRK15110 Location: 314343-315303 bp Feature: domain Description: PRK15110 Location: 3 143 43 -3 153 03 bp Feature: gene Location: 315510-316178 bp Feature: domain Description: PRK09951 Location: 315513-316176 bp Feature: domain Description: PRK09951 Location: 3 15513 -3 16176 bp Feature: gene Location: 316379-317287 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 316652-317108 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3 16652-3 17108 bp Feature: gene Location: 317960-319225 bp Feature: domain Description: umuC Location: 317963-319223 bp Feature: domain Description: umuC Location: 3 17963 -3 19223 bp Feature: gene Location: 319227-319646 bp Feature: domain Description: PRK10276 Location: 319230-319641 bp Feature: domain Description: PRK10276 Location: 3 1923 0-3 19641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)