myRT

myRT report for GCA_004803105.1_ASM480310v1

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Seq: SSUS01000063.1 (20690 bp)
Overview 1 RT 1: 3115-7025 bp Neighborhood of RT #1 [3115, 7027] RVT_N RVT-GII GIIM HNHc DUF1380 Antirestrict Feature: gene Location: 3115-3390 bp Feature: gene Location: 3502-3684 bp Feature: gene Location: 3964-5631 bp Feature: domain Description: RVT_N Location: 4012-4249 bp Feature: domain Description: RVT_N Location: 401 2-4249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4300-4942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4300-4942 bp Feature: domain Description: GIIM Note: maturase Location: 4993-5227 bp Feature: domain Description: GIIM Note: maturase Location: 4993-5227 bp Feature: domain Description: HNHc Note: nucleases Location: 5437-5596 bp Feature: domain Description: HNHc Note: nucleases Location: 5437-5596 bp Feature: gene Location: 6133-6555 bp Feature: domain Description: DUF1380 Location: 6136-6433 bp Feature: domain Description: DUF1 380 Location: 61 36-6433 bp Feature: gene Location: 6602-7027 bp Feature: domain Description: Antirestrict Location: 6737-7025 bp Feature: domain Description: Antirestrict Location: 6737-7025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128), Antirestrict (pfam03230)

Seq: SSUS01000007.1 (163670 bp)
Overview 1 RT 1: 28816-35059 bp Neighborhood of RT #1 [28816, 35196] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28816-29082 bp Feature: domain Description: Phage_integrase Location: 28882-28978 bp Feature: domain Description: Phage_integrase Location: 2 8882 -2 8978 bp Feature: gene Location: 29165-29635 bp Feature: gene Location: 29982-33191 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30510-30999 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30510-30999 bp Feature: domain Description: nitrilase Location: 32505-33102 bp Feature: domain Description: nitrilase Location: 32 505-33102 bp Feature: gene Location: 33486-34289 bp Feature: domain Description: AbiEi_3_N Location: 33519-33780 bp Feature: domain Description: AbiEi_3_N Location: 33519-33780 bp Feature: domain Description: AbiEi_3 Location: 33792-34248 bp Feature: domain Description: AbiEi_3 Location: 33792 -342 48 bp Feature: gene Location: 34276-35196 bp Feature: domain Description: AbiEii Location: 34318-35059 bp Feature: domain Description: AbiEii Location: 34318-35059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)