myRT

myRT report for GCA_004803975.1_ASM480397v1

Download annotations/find similar RTs

Seq: QFRN01000012.1 (182096 bp)
Overview 1 RT 1: 99486-103427 bp Neighborhood of RT #1 [99486, 103427] RVT-Retrons Feature: gene Location: 99486-100625 bp Feature: gene Location: 100671-100838 bp Feature: gene Location: 100860-102632 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 101019-101637 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 01 01 9-1 01 637 bp Feature: gene Location: 102853-102996 bp Feature: gene Location: 103188-103427 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: QFRN01000041.1 (11518 bp)
Overview 1 RT 1: 117-1140 bp Neighborhood of RT #1 [117, 1148] RVT-GII PRK10173 PRK10173 Feature: gene Location: 117-365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135-207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135-2 07 bp Feature: gene Location: 404-715 bp Feature: domain Description: PRK10173 Location: 407-626 bp Feature: domain Description: PRK10173 Location: 407-62 6 bp Feature: gene Location: 699-1148 bp Feature: domain Description: PRK10173 Location: 702-1140 bp Feature: domain Description: PRK10173 Location: 702 -1140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: QFRN01000049.1 (4252 bp)
Overview 1 RT 1: 131-3593 bp Neighborhood of RT #1 [131, 3631] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 131-610 bp Feature: domain Description: PHA02517 Location: 191-545 bp Feature: domain Description: PHA02517 Location: 191-545 bp Feature: gene Location: 1202-2725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1475-2207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1475-2207 bp Feature: domain Description: GIIM Note: maturase Location: 2282-2480 bp Feature: domain Description: GIIM Note: maturase Location: 2282-2480 bp Feature: gene Location: 2902-3198 bp Feature: domain Description: PHA02517 Location: 2905-3154 bp Feature: domain Description: PHA02517 Location: 2905-3 154 bp Feature: gene Location: 3227-3631 bp Feature: domain Description: InsE Location: 3257-3593 bp Feature: domain Description: InsE Location: 3 257-3 593 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: QFRN01000038.1 (13380 bp)
Overview 1 RT 1: 7194-11067 bp Neighborhood of RT #1 [7194, 11438] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7194-7370 bp Feature: gene Location: 7778-8482 bp Feature: domain Description: SLATT_5 Location: 7940-8450 bp Feature: domain Description: SLATT_5 Location: 794 0-84 50 bp Feature: gene Location: 8460-9830 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8688-9294 bp Feature: gene Location: 9943-10527 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: domain Description: Caudo_TAP Location: 10159-10516 bp Feature: gene Location: 10536-11438 bp Feature: domain Description: Macro_Appr_pase Location: 10554-11067 bp Feature: domain Description: Macro_Appr_pase Location: 10554 -11067 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)