myRT

myRT report for GCA_004919555.1_ASM491955v1

Download annotations/find similar RTs

Seq: SNQV01000025.1 (47006 bp)
Overview 1 RT 1: 165-4600 bp Neighborhood of RT #1 [165, 4600] RVT-Retrons ComA-like_MBL-fold Feature: gene Location: 165-326 bp Feature: gene Location: 412-2121 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 565-1162 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 565-1 1 62 bp Feature: gene Location: 2565-3983 bp Feature: domain Description: ComA-like_MBL-fold Location: 3114-3600 bp Feature: domain Description: ComA-like_MBL-fold Location: 31 1 4-3600 bp Feature: gene Location: 4337-4600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ComA-like_MBL-fold (cd07731)

Seq: SNQV01000323.1 (1524 bp)
Overview 1 RT 1: 4-1522 bp Neighborhood of RT #1 [4, 1522] RVT-GII GIIM Feature: gene Location: 4-1272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208-865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 08-865 bp Feature: domain Description: GIIM Note: maturase Location: 943-1165 bp Feature: domain Description: GIIM Note: maturase Location: 943-1165 bp Feature: gene Location: 1346-1522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SNQV01000327.1 (1264 bp)
Overview 1 RT 1: 87-1197 bp Neighborhood of RT #1 [87, 1262] RVT-GII GIIM Feature: gene Location: 87-1262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 327-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 27-942 bp Feature: domain Description: GIIM Note: maturase Location: 987-1197 bp Feature: domain Description: GIIM Note: maturase Location: 987-1197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SNQV01000013.1 (4428 bp)
Overview 1 RT 1: 1593-3412 bp Neighborhood of RT #1 [1593, 4203] PRK14975 RVT-UG9 Feature: gene Location: 1593-2573 bp Feature: domain Description: PRK14975 Location: 1797-2514 bp Feature: domain Description: PRK14 975 Location: 1797-2514 bp Feature: gene Location: 2686-2970 bp Feature: gene Location: 3133-4203 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3139-3412 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3139-34 12 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9

Seq: SNQV01000179.1 (36925 bp)
Overview 1 RT 1: 29747-35683 bp Neighborhood of RT #1 [29747, 35718] modC_ABC Top1 RVT-GII Intron_maturas2 HNHc DUF2625 Feature: gene Location: 29747-30835 bp Feature: domain Description: modC_ABC Location: 29762-30827 bp Feature: domain Description: modC_ABC Location: 29762-30827 bp Feature: gene Location: 30924-31979 bp Feature: domain Description: Top1 Location: 30957-31971 bp Feature: domain Description: Top1 Location: 3095 7-31971 bp Feature: gene Location: 32810-34645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33071-33884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33071-33884 bp Feature: domain Description: Intron_maturas2 Location: 33980-34295 bp Feature: domain Description: Intron_maturas2 Location: 33980-34295 bp Feature: domain Description: HNHc Note: nucleases Location: 34418-34583 bp Feature: domain Description: HNHc Note: nucleases Location: 34418-345 83 bp Feature: gene Location: 34885-35076 bp Feature: gene Location: 35083-35718 bp Feature: domain Description: DUF2625 Location: 35095-35683 bp Feature: domain Description: DUF2625 Location: 35 095 -35 683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT modC_ABC (TIGR02142), Top1 (COG3569), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2625 (pfam10946)