myRT

myRT report for GCA_004919565.1_ASM491956v1

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Seq: SNQU01000340.1 (1379 bp)
Overview 1 RT 1: 108-1269 bp Neighborhood of RT #1 [108, 1376] RVT-GII GIIM Feature: gene Location: 108-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 2-969 bp Feature: domain Description: GIIM Note: maturase Location: 1047-1269 bp Feature: domain Description: GIIM Note: maturase Location: 1 047-1 269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SNQU01000334.1 (1265 bp)
Overview 1 RT 1: 3-1116 bp Neighborhood of RT #1 [3, 1181] RVT-GII GIIM Feature: gene Location: 3-1181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 46-861 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SNQU01000023.1 (47055 bp)
Overview 1 RT 1: 165-4600 bp Neighborhood of RT #1 [165, 4600] RVT-Retrons ComA-like_MBL-fold Feature: gene Location: 165-326 bp Feature: gene Location: 412-2121 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 565-1162 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 565-1162 bp Feature: gene Location: 2565-3983 bp Feature: domain Description: ComA-like_MBL-fold Location: 3114-3600 bp Feature: domain Description: ComA-like_MBL-fold Location: 3 114-3 600 bp Feature: gene Location: 4337-4600 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ComA-like_MBL-fold (cd07731)

Seq: SNQU01000012.1 (4887 bp)
Overview 1 RT 1: 1638-3910 bp Neighborhood of RT #1 [1638, 4662] UvrD_C RVT-UG9 Feature: gene Location: 1638-2582 bp Feature: gene Location: 2943-3533 bp Feature: domain Description: UvrD_C Location: 3267-3462 bp Feature: domain Description: UvrD_C Location: 3267-34 62 bp Feature: gene Location: 3631-4662 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3637-3910 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3637-3910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD_C (pfam13361), RVT-UG9

Seq: SNQU01000187.1 (37152 bp)
Overview 1 RT 1: 29974-35910 bp Neighborhood of RT #1 [29974, 35945] modC_ABC Top1 RVT-GII Intron_maturas2 HNHc DUF2625 Feature: gene Location: 29974-31062 bp Feature: domain Description: modC_ABC Location: 29989-31054 bp Feature: domain Description: modC_ABC Location: 29989-3105 4 bp Feature: gene Location: 31151-32206 bp Feature: domain Description: Top1 Location: 31184-32198 bp Feature: domain Description: Top1 Location: 31184-32198 bp Feature: gene Location: 33037-34872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33298-34111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33298-34111 bp Feature: domain Description: Intron_maturas2 Location: 34207-34522 bp Feature: domain Description: Intron_maturas2 Location: 34207-345 22 bp Feature: domain Description: HNHc Note: nucleases Location: 34645-34810 bp Feature: domain Description: HNHc Note: nucleases Location: 34645 -34810 bp Feature: gene Location: 35112-35303 bp Feature: gene Location: 35310-35945 bp Feature: domain Description: DUF2625 Location: 35322-35910 bp Feature: domain Description: DUF2625 Location: 35 322-35 910 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT modC_ABC (TIGR02142), Top1 (COG3569), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2625 (pfam10946)