myRT

myRT report for GCA_004919585.1_ASM491958v1

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Seq: SNQT01000342.1 (1265 bp)
Overview 1 RT 1: 3-1116 bp Neighborhood of RT #1 [3, 1181] RVT-GII GIIM Feature: gene Location: 3-1181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246-861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 246-861 bp Feature: domain Description: GIIM Note: maturase Location: 906-1116 bp Feature: domain Description: GIIM Note: maturase Location: 906-1 1 1 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SNQT01000011.1 (4883 bp)
Overview 1 RT 1: 1636-3908 bp Neighborhood of RT #1 [1636, 4660] UvrD_C RVT-UG9 Feature: gene Location: 1636-2580 bp Feature: gene Location: 2941-3531 bp Feature: domain Description: UvrD_C Location: 3265-3460 bp Feature: domain Description: UvrD_C Location: 32 65-3460 bp Feature: gene Location: 3629-4660 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3635-3908 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 3635-3908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrD_C (pfam13361), RVT-UG9

Seq: SNQT01000024.1 (47051 bp)
Overview 1 RT 1: 163-4598 bp Neighborhood of RT #1 [163, 4598] RVT-Retrons ComA-like_MBL-fold Feature: gene Location: 163-324 bp Feature: gene Location: 410-2119 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 563-1160 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 563 -1160 bp Feature: gene Location: 2563-3981 bp Feature: domain Description: ComA-like_MBL-fold Location: 3112-3598 bp Feature: domain Description: ComA-like_MBL-fold Location: 3 112-3 598 bp Feature: gene Location: 4335-4598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ComA-like_MBL-fold (cd07731)

Seq: SNQT01000339.1 (1379 bp)
Overview 1 RT 1: 108-1269 bp Neighborhood of RT #1 [108, 1376] RVT-GII GIIM Feature: gene Location: 108-1376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312-969 bp Feature: domain Description: GIIM Note: maturase Location: 1047-1269 bp Feature: domain Description: GIIM Note: maturase Location: 104 7-1269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: SNQT01000189.1 (45419 bp)
Overview 1 RT 1: 38243-44179 bp Neighborhood of RT #1 [38243, 44214] modC_ABC Top1 RVT-GII Intron_maturas2 HNHc DUF2625 Feature: gene Location: 38243-39331 bp Feature: domain Description: modC_ABC Location: 38258-39323 bp Feature: domain Description: modC_ABC Location: 3825 8-39323 bp Feature: gene Location: 39420-40475 bp Feature: domain Description: Top1 Location: 39453-40467 bp Feature: domain Description: Top1 Location: 3945 3-40467 bp Feature: gene Location: 41306-43141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41567-42380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415 67-42380 bp Feature: domain Description: Intron_maturas2 Location: 42476-42791 bp Feature: domain Description: Intron_maturas2 Location: 42476-42791 bp Feature: domain Description: HNHc Note: nucleases Location: 42914-43079 bp Feature: domain Description: HNHc Note: nucleases Location: 42914-43079 bp Feature: gene Location: 43381-43572 bp Feature: gene Location: 43579-44214 bp Feature: domain Description: DUF2625 Location: 43591-44179 bp Feature: domain Description: DUF2625 Location: 435 91-44179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT modC_ABC (TIGR02142), Top1 (COG3569), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF2625 (pfam10946)