myRT

myRT report for GCA_004922755.1_ASM492275v1

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Seq: QFKT01000008.1 Legionella pneumophila strain C1 NODE_8_length_132745_cov_62.1197_ID_968, whole genome shotgun sequence (132745 bp)
Overview 1 RT 1: 129-3037 bp Neighborhood of RT #1 [129, 3126] PHA02517 RVT-GII RVT_1 GIIM InsE HTH_23 HTH_33 Feature: gene Location: 129-413 bp Feature: domain Description: PHA02517 Location: 135-375 bp Feature: domain Description: PHA0251 7 Location: 1 35-375 bp Feature: gene Location: 492-1646 bp Ori: TIG99810.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 696-894 bp Feature: domain Description: RVT_1 Location: 948-1266 bp Feature: domain Description: RVT_1 Location: 948-1 266 bp Feature: domain Description: GIIM Note: maturase Location: 1344-1563 bp Feature: domain Description: GIIM Note: maturase Location: 1 344-1 563 bp Feature: gene Location: 2213-2476 bp Feature: domain Description: InsE Location: 2222-2477 bp Feature: domain Description: InsE Location: 2222-2477 bp Feature: gene Location: 2569-3126 bp Feature: domain Description: HTH_23 Location: 2656-2779 bp Feature: domain Description: HTH_23 Location: 2656-2779 bp Feature: domain Description: HTH_33 Location: 2872-3037 bp Feature: domain Description: HTH_33 Location: 2872-3037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), InsE (COG2963), HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: QFKT01000006.1 Legionella pneumophila strain C1 NODE_6_length_194188_cov_56.3806_ID_964, whole genome shotgun sequence (194188 bp)
Overview 1 RT 1: 47253-52186 bp Neighborhood of RT #1 [47253, 52200] Tra_M RVT_N RVT-GII GIIM Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 NTP-PPase_MazG_Cterm Feature: gene Location: 47253-47627 bp Ori: TIH00265.1 Feature: domain Description: Tra_M Location: 47301-47496 bp Feature: domain Description: Tra_M Location: 47301-47496 bp Feature: gene Location: 48045-48515 bp Feature: gene Location: 48475-49995 bp Ori: TIH00266.1 Gene: ltrA Feature: domain Description: RVT_N Location: 48532-48775 bp Feature: domain Description: RVT_N Location: 48532 -48775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48820-49444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4882 0-49444 bp Feature: domain Description: GIIM Note: maturase Location: 49495-49729 bp Feature: domain Description: GIIM Note: maturase Location: 49495-4972 9 bp Feature: gene Location: 50066-51517 bp Ori: TIH00267.1 Feature: domain Description: Tnp_DNA_bind Location: 50105-50273 bp Feature: domain Description: Tnp_DNA_bind Location: 50105-502 73 bp Feature: domain Description: DDE_Tnp_1 Location: 50930-51224 bp Feature: domain Description: DDE_Tnp_1 Location: 50930-512 2 4 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 51230-51509 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 512 30-51509 bp Feature: gene Location: 51823-52200 bp Ori: TIH00268.1 Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51850-52186 bp Feature: domain Description: NTP-PPase_MazG_Cterm Location: 51850-52 186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), NTP-PPase_MazG_Cterm (cd11529)

Seq: QFKT01000013.1 Legionella pneumophila strain C1 NODE_13_length_37357_cov_54.1896_ID_978, whole genome shotgun sequence (37357 bp)
Overview 1 RT 1: 32965-37229 bp Neighborhood of RT #1 [32965, 37229] LCB5 RVT-UG18 Feature: gene Location: 32965-33346 bp Feature: domain Description: LCB5 Location: 33016-33241 bp Feature: domain Description: LCB5 Location: 3 3 016-3 3 241 bp Feature: gene Location: 33544-34557 bp Feature: gene Location: 35277-35705 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 35499-35706 bp Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 3 5499-3 5706 bp Feature: gene Location: 35898-37229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LCB5 (COG1597), RVT-UG18