myRT

myRT report for GCA_004922965.1_ASM492296v1

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Seq: SETS01000074.1 (9326 bp)
Overview 1 RT 1: 3973-8344 bp Neighborhood of RT #1 [3973, 8460] InsE PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 3973-4275 bp Feature: domain Description: InsE Location: 3982-4264 bp Feature: domain Description: InsE Location: 3982-4264 bp Feature: gene Location: 4302-4727 bp Feature: domain Description: PHA02517 Location: 4326-4662 bp Feature: domain Description: PHA0251 7 Location: 4326-4662 bp Feature: gene Location: 5319-6842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5592-6324 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5592-6324 bp Feature: domain Description: GIIM Note: maturase Location: 6399-6597 bp Feature: domain Description: GIIM Note: maturase Location: 6399-6597 bp Feature: gene Location: 7007-7165 bp Feature: domain Description: PHA02517 Location: 7010-7130 bp Feature: domain Description: PHA0251 7 Location: 701 0-71 30 bp Feature: gene Location: 7384-8460 bp Feature: domain Description: COG3547 Location: 7423-8344 bp Feature: domain Description: COG3547 Location: 7423-8344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: SETS01000026.1 (77964 bp)
Overview 1 RT 1: 72944-76460 bp Neighborhood of RT #1 [72944, 77692] Nuc_deoxyrib_tr RVT-Retrons AAA_21 Feature: gene Location: 72944-73195 bp Feature: gene Location: 73225-74061 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 73714-73885 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 73714-73885 bp Feature: gene Location: 74717-75817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74897-75431 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74897-75431 bp Feature: gene Location: 75932-77692 bp Feature: domain Description: AAA_21 Location: 76238-76460 bp Feature: domain Description: AAA_2 1 Location: 762 38-76460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_21 (pfam13304)

Seq: SETS01000069.1 (10681 bp)
Overview 1 RT 1: 6101-10679 bp Neighborhood of RT #1 [6101, 10678] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 6101-7066 bp Feature: domain Description: ArdC Location: 6227-7061 bp Feature: domain Description: ArdC Location: 6227-7061 bp Feature: gene Location: 7198-7467 bp Feature: gene Location: 7536-9023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7941-8631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7941-863 1 bp Feature: gene Location: 9429-9860 bp Feature: domain Description: PRK10276 Location: 9480-9843 bp Feature: domain Description: PRK10276 Location: 9480-9843 bp Feature: gene Location: 9860-10678 bp Feature: domain Description: umuC Location: 9863-10679 bp Feature: domain Description: umuC Location: 9863 -10679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: SETS01000017.1 (42349 bp)
Overview 1 RT 1: 13540-16614 bp Neighborhood of RT #1 [13540, 16619] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 13540-13758 bp Feature: domain Description: PRK09678 Location: 13543-13741 bp Feature: domain Description: PRK09678 Location: 1354 3-1374 1 bp Feature: gene Location: 14005-14193 bp Feature: gene Location: 14162-14935 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14297-14750 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 14 297-14 750 bp Feature: gene Location: 15550-16032 bp Feature: domain Description: SmpB Location: 15580-16024 bp Feature: domain Description: SmpB Location: 15580-16024 bp Feature: gene Location: 16143-16619 bp Feature: domain Description: PRK10724 Location: 16149-16614 bp Feature: domain Description: PRK10724 Location: 1614 9-16614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)