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myRT report for GCA_004923175.1_ASM492317v1
Download annotations/find similar RTs
Seq:
SETV01000020.1 (67959 bp)
Overview
1
RT 1: 28761-35629 bp
Neighborhood of RT #1 [28761, 35631]
FimC
FimD
RVT-UG4
Integrase_1
INT_P4_C
Feature: gene
Location: 28761-29489 bp
Feature: domain
Description: FimC
Location: 28809-29472 bp
Feature: domain
Description: FimC
Location: 28809-29472 bp
Feature: gene
Location: 29521-32130 bp
Feature: domain
Description: FimD
Location: 29578-32119 bp
Feature: domain
Description: FimD
Location: 29578-321 1 9 bp
Feature: gene
Location: 32130-34208 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 32538-32982 bp
Feature: RT
Description: RVT-UG4
Note: UG4 RT
Location: 32538-32982 bp
Feature: gene
Location: 34265-34705 bp
Feature: domain
Description: Integrase_1
Location: 34271-34487 bp
Feature: domain
Description: Integrase_1
Location: 34271 -34487 bp
Feature: gene
Location: 34966-35631 bp
Feature: domain
Description: INT_P4_C
Location: 35071-35629 bp
Feature: domain
Description: INT_P4_C
Location: 35071 -35629 bp
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Associated domains:
myRT
FimC (COG3121)
,
FimD (COG3188)
,
RVT-UG4
,
Integrase_1 (pfam12835)
,
INT_P4_C (cd00801)