myRT

myRT report for GCA_004923185.1_ASM492318v1

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Seq: SETZ01000005.1 (39578 bp)
Overview 1 RT 1: 11304-15493 bp Neighborhood of RT #1 [11304, 15493] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII Feature: gene Location: 11304-11975 bp Feature: domain Description: Plasmid_stab_B Location: 11319-11526 bp Feature: domain Description: Plasmid_stab_B Location: 1 1 31 9-1 1 526 bp Feature: domain Description: Plasmid_stab_B Location: 11631-11838 bp Feature: domain Description: Plasmid_stab_B Location: 1 1 631 -1 1 838 bp Feature: gene Location: 11978-12949 bp Feature: domain Description: StbA Location: 11981-12926 bp Feature: domain Description: StbA Location: 1 1 981 -1 2926 bp Feature: gene Location: 13198-14682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13600-14290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3600-1 4290 bp Feature: gene Location: 14736-14969 bp Feature: gene Location: 15098-15493 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII

Seq: SETZ01000010.1 (146871 bp)
Overview 1 RT 1: 107673-114541 bp Neighborhood of RT #1 [107673, 114543] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 107673-108401 bp Feature: domain Description: FimC Location: 107721-108384 bp Feature: domain Description: FimC Location: 10772 1-108384 bp Feature: gene Location: 108433-111042 bp Feature: domain Description: FimD Location: 108490-111031 bp Feature: domain Description: FimD Location: 108490-111031 bp Feature: gene Location: 111042-113120 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 111450-111894 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 111450-111894 bp Feature: gene Location: 113177-113617 bp Feature: domain Description: Integrase_1 Location: 113183-113399 bp Feature: domain Description: Integrase_1 Location: 113183-113399 bp Feature: gene Location: 113878-114543 bp Feature: domain Description: INT_P4_C Location: 113983-114541 bp Feature: domain Description: INT_P4_C Location: 113983-114541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)