myRT

myRT report for GCA_004960365.1_ASM496036v1

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Seq: SSQY01000213.1 (30515 bp)
Overview 1 RT 1: 18372-24403 bp Neighborhood of RT #1 [18372, 24403] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Phage_ASH Feature: gene Location: 18372-19292 bp Feature: domain Description: AbiEii Location: 18414-19155 bp Feature: domain Description: AbiEii Location: 1 841 4-1 91 55 bp Feature: gene Location: 19279-20082 bp Feature: domain Description: AbiEi_3_N Location: 19312-19573 bp Feature: domain Description: AbiEi_3_N Location: 1 931 2-1 9573 bp Feature: domain Description: AbiEi_3 Location: 19585-20041 bp Feature: domain Description: AbiEi_3 Location: 1 9585-20041 bp Feature: gene Location: 20377-23586 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 20905-21394 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 20905-21 394 bp Feature: domain Description: nitrilase Location: 22900-23497 bp Feature: domain Description: nitrilase Location: 22900-23497 bp Feature: gene Location: 23747-23887 bp Feature: domain Description: Phage_ASH Location: 23774-23867 bp Feature: domain Description: Phage_ASH Location: 23774-23867 bp Feature: gene Location: 23933-24403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424), Phage_ASH (pfam10554)

Seq: SSQY01000254.1 (13474 bp)
Overview 1 RT 1: 206-3621 bp Neighborhood of RT #1 [206, 3626] Tra5 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 206-637 bp Feature: domain Description: Tra5 Location: 212-629 bp Feature: domain Description: Tra5 Location: 2 12 -62 9 bp Feature: gene Location: 748-978 bp Feature: gene Location: 1030-2271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1303-2035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1303-2 035 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2266 bp Feature: domain Description: GIIM Note: maturase Location: 2 110-2 2 66 bp Feature: gene Location: 2863-3330 bp Feature: domain Description: PHA02517 Location: 2929-3268 bp Feature: domain Description: PHA02 517 Location: 2 92 9-32 68 bp Feature: gene Location: 3327-3626 bp Feature: domain Description: InsE Location: 3357-3621 bp Feature: domain Description: InsE Location: 3357-362 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)