myRT

myRT report for GCA_004962025.1_ASM496202v1

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Seq: SUHP01000012.1 (129345 bp)
Overview 1 RT 1: 97158-104549 bp Neighborhood of RT #1 [97158, 104549] YjgR DUF87 YjgR SIR2_2 RVT-UG7 AbiEii Feature: gene Location: 97158-99164 bp Feature: domain Description: YjgR Location: 97629-97902 bp Feature: domain Description: YjgR Location: 97629-97902 bp Feature: domain Description: DUF87 Location: 98553-98640 bp Feature: domain Description: DUF87 Location: 98553-98640 bp Feature: domain Description: YjgR Location: 98658-99033 bp Feature: domain Description: YjgR Location: 98658-99033 bp Feature: gene Location: 99161-100492 bp Feature: domain Description: SIR2_2 Location: 99803-100244 bp Feature: domain Description: SIR2_2 Location: 99803-1 00244 bp Feature: gene Location: 100714-102306 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 101116-101527 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 01 1 1 6-1 01 527 bp Feature: gene Location: 102844-103887 bp Feature: domain Description: AbiEii Location: 102988-103846 bp Feature: domain Description: AbiEii Location: 1 02988-1 03846 bp Feature: gene Location: 103884-104549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjgR (COG0433), DUF87 (pfam01935), SIR2_2 (pfam13289), RVT-UG7, AbiEii (pfam08843)

Seq: SUHP01000142.1 (5171 bp)
Overview 1 RT 1: 559-3390 bp Neighborhood of RT #1 [559, 3428] ugpC RVT-GII RVT-GII DEDD_Tnp_IS110 Feature: gene Location: 559-942 bp Feature: domain Description: ugpC Location: 565-937 bp Feature: domain Description: ugpC Location: 565-937 bp Feature: gene Location: 1173-1526 bp Feature: gene Location: 1588-1815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591-1756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1591-1756 bp Feature: gene Location: 1991-2449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2246-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 46-2 42 9 bp Feature: gene Location: 2640-2843 bp Feature: gene Location: 3078-3428 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3093-3390 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 3093-3390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ugpC (PRK11650), RVT-GII, DEDD_Tnp_IS110 (pfam01548)

Seq: SUHP01000026.1 (90549 bp)
Overview 1 RT 1: 83674-90281 bp Neighborhood of RT #1 [83674, 90281] Spo0J RVT-GII GIIM PRK07078 Toprim_3 Feature: gene Location: 83674-84870 bp Feature: gene Location: 85035-87125 bp Feature: domain Description: Spo0J Location: 85080-85833 bp Feature: domain Description: Spo0J Location: 85080-8583 3 bp Feature: gene Location: 87596-88975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87926-88544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87926-88544 bp Feature: domain Description: GIIM Note: maturase Location: 88595-88820 bp Feature: domain Description: GIIM Note: maturase Location: 88595-88820 bp Feature: gene Location: 89070-90107 bp Feature: domain Description: PRK07078 Location: 89091-89385 bp Feature: domain Description: PRK07078 Location: 89091-893 85 bp Feature: domain Description: Toprim_3 Location: 89766-90030 bp Feature: domain Description: Toprim_3 Location: 89766-9003 0 bp Feature: gene Location: 90135-90281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Spo0J (COG1475), RVT-GII, GIIM (pfam08388), PRK07078 (hypothetical protein; Validated), Toprim_3 (pfam13362)

Seq: SUHP01000134.1 (8259 bp)
Overview 1 RT 1: 6508-8257 bp Neighborhood of RT #1 [6508, 8257] RVT-GII Feature: gene Location: 6508-6729 bp Feature: gene Location: 7434-7805 bp Feature: gene Location: 7804-7974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7861-7939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7861-7939 bp Feature: gene Location: 8093-8257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SUHP01000087.1 (20199 bp)
Overview 1 RT 1: 17741-19521 bp Neighborhood of RT #1 [17741, 19598] DDE_3 GIIM RVT-GII Feature: gene Location: 17741-18289 bp Feature: domain Description: DDE_3 Location: 17771-18170 bp Feature: domain Description: DDE_3 Location: 17771-18170 bp Feature: gene Location: 18343-18645 bp Feature: domain Description: GIIM Note: maturase Location: 18346-18559 bp Feature: domain Description: GIIM Note: maturase Location: 18346-185 5 9 bp Feature: gene Location: 18651-19598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18867-19521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18867-195 21 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), GIIM (pfam08388), RVT-GII

Seq: SUHP01000099.1 (14806 bp)
Overview 1 RT 1: 707-4297 bp Neighborhood of RT #1 [707, 4297] RVT-GII PRK08181 Feature: gene Location: 707-1450 bp Feature: gene Location: 1774-2001 bp Feature: gene Location: 2015-2419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021-2414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2021-2414 bp Feature: gene Location: 3128-3850 bp Feature: domain Description: PRK08181 Location: 3131-3323 bp Feature: domain Description: PRK08181 Location: 3131-3323 bp Feature: gene Location: 3620-4297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK08181 (transposase; Validated)