myRT

myRT report for GCA_004964595.1_ASM496459v1

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Seq: SUBH01000054.1 (19736 bp)
Overview 1 RT 1: 4776-9229 bp Neighborhood of RT #1 [4776, 9229] TnpB_IS66 RVT-GII GatA Feature: gene Location: 4776-5129 bp Feature: domain Description: TnpB_IS66 Location: 4803-5091 bp Feature: domain Description: TnpB_IS66 Location: 4803-5091 bp Feature: gene Location: 5284-5439 bp Feature: gene Location: 5843-6319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5993-6098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5993-6098 bp Feature: gene Location: 7013-8494 bp Feature: domain Description: GatA Location: 7031-8426 bp Feature: domain Description: GatA Location: 7031 -8426 bp Feature: gene Location: 8906-9229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), RVT-GII, GatA (COG0154)

Seq: SUBH01000049.1 (23489 bp)
Overview 1 RT 1: 4906-9653 bp Neighborhood of RT #1 [4906, 9757] AccC RVT-GII TroA_e Feature: gene Location: 4906-6126 bp Feature: domain Description: AccC Location: 4909-6118 bp Feature: domain Description: AccC Location: 4909-6118 bp Feature: gene Location: 6363-6710 bp Feature: gene Location: 6718-8193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7126-7816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 712 6-7816 bp Feature: gene Location: 7979-8521 bp Feature: gene Location: 8702-9757 bp Feature: domain Description: TroA_e Location: 8804-9653 bp Feature: domain Description: TroA_e Location: 8804-9653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AccC (COG0439), RVT-GII, TroA_e (cd01142)

Seq: SUBH01000091.1 (3708 bp)
Overview 1 RT 1: 1304-3219 bp Neighborhood of RT #1 [1304, 3386] Phage_int_SAM_1 INT_RitC_C_like RVT-GII GIIM Feature: gene Location: 1304-2272 bp Feature: domain Description: Phage_int_SAM_1 Location: 1319-1568 bp Feature: domain Description: Phage_int_SAM_1 Location: 13 19-1568 bp Feature: domain Description: INT_RitC_C_like Location: 1655-2198 bp Feature: domain Description: INT_RitC_C_like Location: 1655-2198 bp Feature: gene Location: 2355-2624 bp Feature: gene Location: 2703-3386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-2934 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273 0-293 4 bp Feature: domain Description: GIIM Note: maturase Location: 3003-3219 bp Feature: domain Description: GIIM Note: maturase Location: 3 003 -3 219 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, GIIM (pfam08388)