myRT

myRT report for GCA_005045795.1_ASM504579v1

Download annotations/find similar RTs

Seq: RREV01000074.1 (9862 bp)
Overview 1 RT 1: 1622-5766 bp Neighborhood of RT #1 [1622, 5766] DinI RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 1622-1870 bp Feature: domain Description: DinI Location: 1679-1859 bp Feature: domain Description: DinI Location: 1 679-1 859 bp Feature: gene Location: 1981-2250 bp Feature: gene Location: 2893-4617 bp Feature: domain Description: RVT_N Location: 2950-3187 bp Feature: domain Description: RVT_N Location: 2950-31 87 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3238-3886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3238-3886 bp Feature: domain Description: YkfC Location: 4018-4174 bp Feature: domain Description: YkfC Location: 401 8-41 74 bp Feature: domain Description: HNHc Note: nucleases Location: 4402-4561 bp Feature: domain Description: HNHc Note: nucleases Location: 4402-4561 bp Feature: gene Location: 4855-5589 bp Feature: domain Description: DUF1281 Location: 4927-5284 bp Feature: domain Description: DUF1 281 Location: 4927-5284 bp Feature: domain Description: DUF1281_C Location: 5290-5533 bp Feature: domain Description: DUF1 281 _C Location: 5290-5533 bp Feature: gene Location: 5593-5766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)

Seq: RREV01000012.1 (154073 bp)
Overview 1 RT 1: 21920-28163 bp Neighborhood of RT #1 [21920, 28300] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 21920-22186 bp Feature: domain Description: Phage_integrase Location: 21986-22082 bp Feature: domain Description: Phage_integrase Location: 2 1986-2 2 082 bp Feature: gene Location: 22269-22739 bp Feature: gene Location: 23086-26295 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23614-24103 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3614-2 4103 bp Feature: domain Description: nitrilase Location: 25609-26206 bp Feature: domain Description: nitrilase Location: 2 5609-2 62 06 bp Feature: gene Location: 26590-27393 bp Feature: domain Description: AbiEi_3_N Location: 26623-26884 bp Feature: domain Description: AbiEi_3_N Location: 2 662 3-2 6884 bp Feature: domain Description: AbiEi_3 Location: 26896-27352 bp Feature: domain Description: AbiEi_3 Location: 2 6896-2 7352 bp Feature: gene Location: 27380-28300 bp Feature: domain Description: AbiEii Location: 27422-28163 bp Feature: domain Description: AbiEii Location: 2 742 2 -2 8163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: RREV01000024.1 (67522 bp)
Overview 1 RT 1: 4222-8540 bp Neighborhood of RT #1 [4222, 8557] Psu RVT-UG17 SLATT_5 PRK09692 Feature: gene Location: 4222-4794 bp Feature: domain Description: Psu Location: 4240-4777 bp Feature: domain Description: Psu Location: 4240-4777 bp Feature: gene Location: 4847-4996 bp Feature: gene Location: 5117-6526 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 5354-5966 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 53 54-5966 bp Feature: gene Location: 6625-7362 bp Feature: domain Description: SLATT_5 Location: 6724-7330 bp Feature: domain Description: SLATT_5 Location: 6724-73 3 0 bp Feature: gene Location: 7379-8557 bp Feature: domain Description: PRK09692 Location: 7388-8540 bp Feature: domain Description: PRK09692 Location: 73 88-8540 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG17, SLATT_5 (pfam18160), PRK09692 (Integrase; provisional)