myRT

myRT report for GCA_005048095.1_ASM504809v1

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Seq: SULS01000032.1 (52182 bp)
Overview 1 RT 1: 36421-40249 bp Neighborhood of RT #1 [36421, 40269] INT_Cre_C RVT-GII HHA Feature: gene Location: 36421-36738 bp Feature: gene Location: 36804-37940 bp Feature: domain Description: INT_Cre_C Location: 37227-37881 bp Feature: domain Description: INT_Cre_C Location: 37227-37881 bp Feature: gene Location: 38147-39514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38552-39083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38552-39083 bp Feature: gene Location: 39520-39687 bp Feature: gene Location: 40015-40269 bp Feature: domain Description: HHA Location: 40066-40249 bp Feature: domain Description: HHA Location: 40066-40249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: SULS01000004.1 (241501 bp)
Overview 1 RT 1: 59-5825 bp Neighborhood of RT #1 [59, 5890] PHA02517 InsE RVT-UG8 INT_P4_C PRK09692 Feature: gene Location: 59-415 bp Feature: domain Description: PHA02517 Location: 83-380 bp Feature: domain Description: PHA02 517 Location: 83-380 bp Feature: gene Location: 690-974 bp Feature: domain Description: InsE Location: 705-963 bp Feature: domain Description: InsE Location: 705-963 bp Feature: gene Location: 1510-3510 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2014-2458 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 014-2 458 bp Feature: gene Location: 4926-5108 bp Feature: domain Description: INT_P4_C Location: 4929-5103 bp Feature: domain Description: INT_P4_C Location: 492 9-5103 bp Feature: gene Location: 5366-5890 bp Feature: domain Description: PRK09692 Location: 5372-5825 bp Feature: domain Description: PRK09692 Location: 5372 -582 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-UG8, INT_P4_C (cd00801), PRK09692 (Integrase; provisional)