myRT

myRT report for GCA_005048105.1_ASM504810v1

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Seq: SULW01000030.1 Klebsiella pneumoniae strain 1811130034 blood API 5205773 NODE_30_length_52503_cov_11.1389, whole genome shotgun sequence (52503 bp)
Overview 1 RT 1: 36742-40570 bp Neighborhood of RT #1 [36742, 40590] INT_Cre_C RVT-GII HHA Feature: gene Location: 36742-37059 bp Feature: gene Location: 37125-38261 bp Ori: TJZ21540.1 Feature: domain Description: INT_Cre_C Location: 37548-38202 bp Feature: domain Description: INT_Cre_C Location: 37548-38202 bp Feature: gene Location: 38347-39832 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38749-39280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38749-39280 bp Feature: gene Location: 39832-40044 bp Feature: gene Location: 40336-40590 bp Ori: TJZ21542.1 Feature: domain Description: HHA Location: 40387-40570 bp Feature: domain Description: HHA Location: 40387-40570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: SULW01000004.1 Klebsiella pneumoniae strain 1811130034 blood API 5205773 NODE_4_length_241501_cov_10.3362, whole genome shotgun sequence (241501 bp)
Overview 1 RT 1: 122-7475 bp Neighborhood of RT #1 [122, 7510] InsE RVT-UG8 RVT-UG3 PRK09692 proA Feature: gene Location: 122-974 bp Feature: domain Description: InsE Location: 137-395 bp Feature: domain Description: InsE Location: 137-395 bp Feature: gene Location: 1510-3510 bp Ori: TJZ30962.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2014-2458 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 014-2 458 bp Feature: gene Location: 3511-4737 bp Ori: TJZ30963.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-42 67 bp Feature: gene Location: 4741-5890 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: domain Description: PRK09692 Location: 4747-52 00 bp Feature: gene Location: 6257-7510 bp Ori: TJZ30964.1 Gene: proA Feature: domain Description: proA Location: 6284-7475 bp Feature: domain Description: proA Location: 62 84-7475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), proA (TIGR00407)