myRT

myRT report for GCA_005048625.1_ASM504862v1

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Seq: SUPN01000120.1 Raoultella planticola strain KS-EMBGN NODE_120_length_1449_cov_76.968230, whole genome shotgun sequence (1449 bp)
Overview 1 RT 1: 40-1132 bp Neighborhood of RT #1 [40, 1449] RVT-GII Feature: gene Location: 40-1449 bp Ori: TJZ59476.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1 1 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SUPN01000006.1 Raoultella planticola strain KS-EMBGN NODE_6_length_264875_cov_25.838556, whole genome shotgun sequence (264875 bp)
Overview 1 RT 1: 237713-241424 bp Neighborhood of RT #1 [237713, 241438] Antirestrict RVT-GII PRK10276 Feature: gene Location: 237713-238138 bp Ori: TJZ69302.1 Feature: domain Description: Antirestrict Location: 237848-238136 bp Feature: domain Description: Antirestrict Location: 2 37848-2 38136 bp Feature: gene Location: 238659-238889 bp Feature: gene Location: 239123-240607 bp Ori: TJZ69303.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 239525-240215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3952 5-2 402 15 bp Feature: gene Location: 240607-240858 bp Feature: gene Location: 241013-241438 bp Ori: TJZ69305.1 Gene: umuD Feature: domain Description: PRK10276 Location: 241016-241424 bp Feature: domain Description: PRK102 76 Location: 2 41016-2 4142 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: SUPN01000036.1 Raoultella planticola strain KS-EMBGN NODE_36_length_49234_cov_23.687519, whole genome shotgun sequence (49234 bp)
Overview 1 RT 1: 667-6298 bp Neighborhood of RT #1 [667, 6318] PRK09692 RVT-UG3 RVT-UG8 PRK09678 Psu Feature: gene Location: 667-1845 bp Ori: TJZ62494.1 Feature: domain Description: PRK09692 Location: 673-1831 bp Feature: domain Description: PRK09692 Location: 673 -183 1 bp Feature: gene Location: 1847-3043 bp Ori: TJZ62495.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2132-2594 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 213 2-2594 bp Feature: gene Location: 3047-5050 bp Ori: TJZ62496.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3542-3989 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3 542-3 989 bp Feature: gene Location: 5490-5762 bp Ori: TJZ62497.1 Feature: domain Description: PRK09678 Location: 5499-5667 bp Feature: domain Description: PRK09678 Location: 5499-5667 bp Feature: gene Location: 5764-6318 bp Ori: TJZ62498.1 Feature: domain Description: Psu Location: 5788-6298 bp Feature: domain Description: Psu Location: 5788-6298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG3, RVT-UG8, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)