myRT

myRT report for GCA_005048685.1_ASM504868v1

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Seq: SURP01000210.1 Mesorhizobium sp. isolate N.Ca.ET.047.01.1 NODE_210_length_7057_cov_11.926307, whole genome shotgun sequence (7057 bp)
Overview 1 RT 1: 2469-6335 bp Neighborhood of RT #1 [2469, 6335] Phage_int_SAM_1 INT_RitC_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 2469-3467 bp Feature: domain Description: Phage_int_SAM_1 Location: 2514-2760 bp Feature: domain Description: Phage_int_SAM_1 Location: 251 4-2760 bp Feature: domain Description: INT_RitC_C_like Location: 2850-3393 bp Feature: domain Description: INT_RitC_C_like Location: 2850-3393 bp Feature: gene Location: 3770-4765 bp Feature: domain Description: Phage_int_SAM_1 Location: 3818-4052 bp Feature: domain Description: Phage_int_SAM_1 Location: 381 8-4052 bp Feature: domain Description: INT_RitC_C_like Location: 4151-4685 bp Feature: domain Description: INT_RitC_C_like Location: 41 51 -4685 bp Feature: gene Location: 4869-5465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4878-5088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4878-5088 bp Feature: gene Location: 5788-5955 bp Feature: gene Location: 5991-6335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII

Seq: SURP01000225.1 Mesorhizobium sp. isolate N.Ca.ET.047.01.1 NODE_225_length_5834_cov_4.823499, whole genome shotgun sequence (4868 bp)
Overview 1 RT 1: 3579-4675 bp Neighborhood of RT #1 [3579, 4866] RVT-GII Feature: gene Location: 3579-3737 bp Feature: gene Location: 3816-4085 bp Feature: gene Location: 4309-4866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4315-4675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4315-4675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SURP01000246.1 Mesorhizobium sp. isolate N.Ca.ET.047.01.1 NODE_247_length_3811_cov_8.750799, whole genome shotgun sequence (3811 bp)
Overview 1 RT 1: 1327-3809 bp Neighborhood of RT #1 [1327, 3809] COG3547 COG3415 RVT-GII RVT-GII Feature: gene Location: 1327-1659 bp Feature: domain Description: COG3547 Location: 1333-1654 bp Feature: domain Description: COG3 547 Location: 13 3 3 -1654 bp Feature: gene Location: 1805-2047 bp Feature: domain Description: COG3415 Location: 1808-2036 bp Feature: domain Description: COG3 415 Location: 1808-203 6 bp Feature: gene Location: 2754-3050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2970-3042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2970-3 042 bp Feature: gene Location: 3047-3208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3053-3194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 053 -3 194 bp Feature: gene Location: 3218-3364 bp Feature: gene Location: 3369-3809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), COG3415 (Transposase ), RVT-GII

Seq: SURP01000065.1 Mesorhizobium sp. isolate N.Ca.ET.047.01.1 NODE_65_length_31930_cov_8.249600, whole genome shotgun sequence (31930 bp)
Overview 1 RT 1: 2747-6399 bp 2 RT 2: 16994-21311 bp Neighborhood of RT #1 [2747, 6399] DDE_Tnp_1_4 RVT_N RVT-GII Neighborhood of RT #2 [16994, 21331] GsiA RVT-GII YjgF_YER057c_UK114_family DadA Feature: gene Location: 2747-3241 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2924-3107 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2924 -3107 bp Feature: gene Location: 4125-4253 bp Feature: gene Location: 4311-5258 bp Feature: domain Description: RVT_N Location: 4482-4722 bp Feature: domain Description: RVT_N Location: 4 4 82-4 722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4770-5220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 770-5220 bp Feature: gene Location: 5556-5834 bp Feature: gene Location: 6085-6399 bp Feature: gene Location: 16994-18631 bp Feature: domain Description: GsiA Location: 17000-18575 bp Feature: domain Description: GsiA Location: 17000-18575 bp Feature: gene Location: 18731-18883 bp Feature: gene Location: 19100-19414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19148-19352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1914 8-19352 bp Feature: gene Location: 19522-19905 bp Feature: domain Description: YjgF_YER057c_UK114_family Location: 19597-19888 bp Feature: domain Description: YjgF_YER057c_UK114 _family Location: 19597-19888 bp Feature: gene Location: 20057-21331 bp Feature: domain Description: DadA Location: 20099-21311 bp Feature: domain Description: DadA Location: 20099-21311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT_N (pfam13655), RVT-GII, GsiA (COG1123), YjgF_YER057c_UK114_family (cl10015), DadA (COG0665)