myRT

myRT report for GCA_005048745.1_ASM504874v1

Download annotations/find similar RTs

Seq: SULR01000044.1 Klebsiella pneumoniae strain 1811300002 liver API 5215773 NODE_44_length_13172_cov_7.75906, whole genome shotgun sequence (13172 bp)
Overview 1 RT 1: 122-7475 bp Neighborhood of RT #1 [122, 7510] InsE RVT-UG8 RVT-UG3 PRK09692 proA Feature: gene Location: 122-974 bp Feature: domain Description: InsE Location: 137-395 bp Feature: domain Description: InsE Location: 1 37-395 bp Feature: gene Location: 1510-3510 bp Ori: TJY87999.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2014-2458 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 201 4-2458 bp Feature: gene Location: 3511-4737 bp Ori: TJY88000.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: gene Location: 4741-5890 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: gene Location: 6257-7510 bp Ori: TJY88001.1 Gene: proA Feature: domain Description: proA Location: 6284-7475 bp Feature: domain Description: proA Location: 6284-7475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: SULR01000033.1 Klebsiella pneumoniae strain 1811300002 liver API 5215773 NODE_33_length_43468_cov_7.55052, whole genome shotgun sequence (43468 bp)
Overview 1 RT 1: 36001-39829 bp Neighborhood of RT #1 [36001, 39849] INT_Cre_C RVT-GII HHA Feature: gene Location: 36001-36318 bp Feature: gene Location: 36384-37520 bp Ori: TJY88623.1 Feature: domain Description: INT_Cre_C Location: 36807-37461 bp Feature: domain Description: INT_Cre_C Location: 36807-37461 bp Feature: gene Location: 37606-39091 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38008-38539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38008-38539 bp Feature: gene Location: 39091-39303 bp Feature: gene Location: 39595-39849 bp Ori: TJY88625.1 Feature: domain Description: HHA Location: 39646-39829 bp Feature: domain Description: HHA Location: 39646-3982 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)