myRT

myRT report for GCA_005048755.1_ASM504875v1

Download annotations/find similar RTs

Seq: SULO01000005.1 Klebsiella pneumoniae strain 1812100012 lung abscess API 5205773 NODE_5_length_241501_cov_18.5796, whole genome shotgun sequence (241501 bp)
Overview 1 RT 1: 122-7475 bp Neighborhood of RT #1 [122, 7510] InsE RVT-UG8 RVT-UG3 PRK09692 proA Feature: gene Location: 122-974 bp Feature: domain Description: InsE Location: 137-395 bp Feature: domain Description: InsE Location: 1 37-395 bp Feature: gene Location: 1510-3510 bp Ori: TJY78737.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2014-2458 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 201 4-2458 bp Feature: gene Location: 3511-4737 bp Ori: TJY78738.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: gene Location: 4741-5890 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: gene Location: 6257-7510 bp Ori: TJY78739.1 Gene: proA Feature: domain Description: proA Location: 6284-7475 bp Feature: domain Description: proA Location: 6284-7475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: SULO01000029.1 Klebsiella pneumoniae strain 1812100012 lung abscess API 5205773 NODE_29_length_51793_cov_18.5811, whole genome shotgun sequence (51793 bp)
Overview 1 RT 1: 36032-39860 bp Neighborhood of RT #1 [36032, 39880] INT_Cre_C RVT-GII HHA Feature: gene Location: 36032-36349 bp Feature: gene Location: 36415-37551 bp Ori: TJY72754.1 Feature: domain Description: INT_Cre_C Location: 36838-37492 bp Feature: domain Description: INT_Cre_C Location: 36838-37492 bp Feature: gene Location: 37637-39122 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38039-38570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38039-38570 bp Feature: gene Location: 39122-39334 bp Feature: gene Location: 39626-39880 bp Ori: TJY72756.1 Feature: domain Description: HHA Location: 39677-39860 bp Feature: domain Description: HHA Location: 39677-39860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)