myRT

myRT report for GCA_005048825.1_ASM504882v1

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Seq: SUMA01000006.1 Klebsiella pneumoniae strain 1808200001 feces NODE_6_length_241501_cov_9.23653, whole genome shotgun sequence (241501 bp)
Overview 1 RT 1: 122-7475 bp Neighborhood of RT #1 [122, 7510] InsE RVT-UG8 RVT-UG3 PRK09692 proA Feature: gene Location: 122-974 bp Feature: domain Description: InsE Location: 137-395 bp Feature: domain Description: InsE Location: 1 37-395 bp Feature: gene Location: 1510-3510 bp Ori: TJZ17455.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2014-2458 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 201 4-2458 bp Feature: gene Location: 3511-4737 bp Ori: TJZ17456.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 3799-4267 bp Feature: gene Location: 4741-5890 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: domain Description: PRK09692 Location: 4747-5200 bp Feature: gene Location: 6257-7510 bp Ori: TJZ17457.1 Gene: proA Feature: domain Description: proA Location: 6284-7475 bp Feature: domain Description: proA Location: 6284-7475 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), proA (TIGR00407)

Seq: SUMA01000041.1 Klebsiella pneumoniae strain 1808200001 feces NODE_41_length_19419_cov_11.6257, whole genome shotgun sequence (19419 bp)
Overview 1 RT 1: 11914-15762 bp Neighborhood of RT #1 [11914, 15762] HHA RVT-GII INT_Cre_C Feature: gene Location: 11914-12168 bp Ori: TJZ07394.1 Feature: domain Description: HHA Location: 11965-12148 bp Feature: domain Description: HHA Location: 11965-12 148 bp Feature: gene Location: 12460-12672 bp Feature: gene Location: 12672-14157 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13074-13605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13074-13605 bp Feature: gene Location: 14243-15379 bp Ori: TJZ07396.1 Feature: domain Description: INT_Cre_C Location: 14666-15320 bp Feature: domain Description: INT_Cre_C Location: 14666-1532 0 bp Feature: gene Location: 15445-15762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)