myRT

myRT report for GCA_005048985.1_ASM504898v1

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Seq: SUMH01000308.1 Photobacterium damselae subsp. piscicida strain MT1415 Contig_000308, whole genome shotgun sequence (6045 bp)
Overview 1 RT 1: 2266-5510 bp Neighborhood of RT #1 [2266, 5962] INT_ICEBs1_C_like COG5340 RVT-UG1 Feature: gene Location: 2266-3357 bp Feature: domain Description: INT_ICEBs1_C_like Location: 2638-3163 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 2638-31 63 bp Feature: gene Location: 3747-4271 bp Feature: domain Description: COG5340 Location: 3774-4122 bp Feature: domain Description: COG5340 Location: 3774-41 22 bp Feature: gene Location: 4400-5962 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5021-5510 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 5021 -551 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-UG1

Seq: SUMH01000325.1 Photobacterium damselae subsp. piscicida strain MT1415 Contig_000325, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 37-1054 bp Neighborhood of RT #1 [37, 1281] RVT-GII GIIM Feature: gene Location: 37-1281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-802 bp Feature: domain Description: GIIM Note: maturase Location: 853-1054 bp Feature: domain Description: GIIM Note: maturase Location: 853-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)